rpyANTs 0.0.5
- Added backward compatibility support for Py39
- Fixed the missing powfunction fromnumpy
- Added atropossegments for templates
- New normalization: added atropossegments for
normalization to templates
- ANTsPyNetmodel locations are stored in package data
directory to comply with- CRANpolicy
- Always run abpduring normalization
- Added brain extraction function using base ANTs
- Fixed issue when subject code contains underscore, causing
non-comply BIDSformat, causing parsing errors
- Added fsaveragetemplate for normalization
rpyANTs 0.0.4
- Added get_xformandset_xformto get and
setqforminANTsImage
- Removed dependence nibabel, which might conflict withANTsPyon certain platforms
- Using the full path to ANTsImageclass instead of the
shortcut one fromPythonto avoid issues whereANTsImageis not exported
(ANTsPyx==0.5.3)
- Using multiple imaging files and faster normalization parameters
when normalizing the native images to template
- Fixed get_lib_fnnot available underANTsPyx>=0.5.3
- Changed default Pythonversion
- Fixed bugs when mapping native ROIto template
- Supported YAELprocessing pipeline and useANTsImageas inputs
- Added mapping images from native to template
- Fixed a typo in folder naming
- Method get_native_mappinggets correct absolute
paths
- Allowed YAELclass to add default images through
constructor
- Added intensity correction
- Exported ensure_templateand added extra
information
- Set time-out to ensure downloading the correct templates
- Added YAELclass to support pipelines mentioned in the
paper for image registration and normalization
rpyANTs 0.0.3
- Added registration code that reproduces Halpernlab
results
- Added t1_preprocessto alignMRIto
template using non-linear registration
- No more injection to PythononWindowsas
the memory pointer crash has been fixed by upstream developers
- No active binding to antspynetas thisPythonpackage might fail to load on some systems
rpyANTs 0.0.2
- Added antspynetto the installation
- Added ants_apply_transformsandants_apply_transforms_to_pointsto apply registration
transforms
- Added ants_resample_imageto resample images
- Added antspynet_brain_extractionto extract brain and
strip skulls
- Added antspynet_deep_atroposandantspynet_desikan_killiany_tourville_labelingto segment
brain images
rpyANTs 0.0.1
- Added a NEWS.mdfile to track changes to the
package.