Last updated on 2025-11-16 21:49:51 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 11.86 | 248.50 | 260.36 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.27 | 240.67 | 250.94 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 26.00 | 332.49 | 358.49 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 14.43 | 249.95 | 264.38 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.55 | 304.46 | 319.01 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 11.00 | 177.00 | 188.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 188.00 | 209.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 18.00 | 230.00 | 248.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 26.00 | 230.00 | 256.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [85s/125s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.741, system: 0.069, elapsed: 2.353 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.719, system: 0.208, elapsed: 21.069 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.016, elapsed: 0.592 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.149, system: 0.249, elapsed: 10.160 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.007, elapsed: 0.369 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.549, system: 0.579, elapsed: 35.595 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.654, system: 0.055, elapsed: 3.492 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.161, system: 0.059, elapsed: 9.889 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.010, elapsed: 0.198 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.935, system: 0.255, elapsed: 4.759 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.009, elapsed: 0.215 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.640, system: 0.418, elapsed: 19.372 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.650, system: 0.067, elapsed: 1.877 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.353, system: 0.245, elapsed: 10.690 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.018, elapsed: 0.257 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.130, system: 0.304, elapsed: 5.230 seconds]
Computing values for grid cells...
... done. [user: 0.187, system: 0.015, elapsed: 0.216 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.274, system: 0.291, elapsed: 1.142 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.427, system: 0.982, elapsed: 20.166 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.666, system: 0.069, elapsed: 1.843 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.426, system: 0.163, elapsed: 12.456 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.012, elapsed: 0.326 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.972, system: 0.177, elapsed: 7.382 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.004, elapsed: 0.269 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.797, system: 0.474, elapsed: 18.719 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.906, system: 0.930, elapsed: 41.902 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [84s/159s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.615, system: 0.042, elapsed: 3.742 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.526, system: 0.060, elapsed: 19.497 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.015, elapsed: 0.458 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.858, system: 0.204, elapsed: 8.642 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.007, elapsed: 0.419 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.956, system: 0.355, elapsed: 34.102 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.633, system: 0.037, elapsed: 3.552 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.637, system: 0.108, elapsed: 20.073 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.013, elapsed: 0.353 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.869, system: 0.179, elapsed: 7.397 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.375 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.068, system: 0.373, elapsed: 33.020 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.597, system: 0.035, elapsed: 3.391 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.601, system: 0.096, elapsed: 18.196 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.188, system: 0.011, elapsed: 0.282 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.691, system: 0.175, elapsed: 5.778 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.006, elapsed: 0.265 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.162, system: 0.272, elapsed: 1.307 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.077, system: 0.624, elapsed: 30.411 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.603, system: 0.033, elapsed: 3.379 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.538, system: 0.069, elapsed: 17.224 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.013, elapsed: 0.428 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.732, system: 0.184, elapsed: 6.397 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.003, elapsed: 0.254 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.779, system: 0.572, elapsed: 21.004 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.678, system: 0.899, elapsed: 49.989 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64