Last updated on 2026-04-12 01:51:56 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.70 | 272.80 | 287.50 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.76 | 251.82 | 263.58 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 22.00 | 303.98 | 325.98 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 31.00 | 345.52 | 376.52 | OK | |
| r-devel-macos-arm64 | 1.1.4 | 4.00 | 46.00 | 50.00 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 198.00 | 220.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 17.39 | 342.95 | 360.34 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 12.92 | 348.12 | 361.04 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 12.00 | 496.00 | 508.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 195.00 | 216.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 726.00 | 737.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 243.00 | 267.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [101s/451s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.548, system: 0.047, elapsed: 2.754 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.792, system: 0.209, elapsed: 18.004 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.021, elapsed: 0.838 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.970, system: 0.884, elapsed: 84.861 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.011, elapsed: 0.315 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.302, system: 1.203, elapsed: 107.826 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.732, system: 0.076, elapsed: 3.739 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.636, system: 0.118, elapsed: 24.620 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.024, elapsed: 1.278 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.951, system: 0.906, elapsed: 116.959 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.006, elapsed: 0.407 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.315, system: 1.202, elapsed: 148.247 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.659, system: 0.052, elapsed: 3.422 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.646, system: 0.135, elapsed: 15.800 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.317, system: 0.024, elapsed: 1.204 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.737, system: 0.833, elapsed: 81.467 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.010, elapsed: 0.346 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.335, system: 0.344, elapsed: 1.585 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.629, system: 1.665, elapsed: 105.532 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.674, system: 0.067, elapsed: 2.521 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.751, system: 0.192, elapsed: 15.678 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.017, elapsed: 1.116 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.565, system: 0.719, elapsed: 47.898 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.005, elapsed: 0.184 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.146, system: 0.618, elapsed: 11.978 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.257, system: 1.662, elapsed: 80.439 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [2m/11m]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.625, system: 0.051, elapsed: 3.501 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.649, system: 0.074, elapsed: 16.075 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.217, system: 0.020, elapsed: 1.160 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.919, system: 0.992, elapsed: 160.499 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.009, elapsed: 0.343 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.193, system: 1.265, elapsed: 182.774 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.639, system: 0.044, elapsed: 3.545 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.890, system: 0.137, elapsed: 20.919 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.224, system: 0.019, elapsed: 1.111 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.133, system: 1.135, elapsed: 141.775 seconds]
Computing values for grid cells...
... done. [user: 0.189, system: 0.015, elapsed: 0.595 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.667, system: 1.384, elapsed: 169.276 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.605, system: 0.045, elapsed: 4.886 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.842, system: 0.124, elapsed: 24.875 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.219, system: 0.019, elapsed: 1.085 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.607, system: 0.777, elapsed: 73.511 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.179 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.266, system: 0.274, elapsed: 1.048 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.406, system: 1.290, elapsed: 107.137 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.565, system: 0.035, elapsed: 1.812 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.599, system: 0.094, elapsed: 15.022 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.221, system: 0.018, elapsed: 1.185 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.895, system: 0.887, elapsed: 149.435 seconds]
Computing values for grid cells...
... done. [user: 0.167, system: 0.005, elapsed: 0.205 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.351, system: 0.639, elapsed: 35.129 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 30.509, system: 1.714, elapsed: 203.688 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64