0656b97e6f42e783b1ffb7fb24d6fa3e *DESCRIPTION
856165051d688f8f82dd08b3cda0fd58 *NAMESPACE
e9e6efd2bac34ec839642510cea33c27 *NEWS.md
1cef4aa5a7f6cc0404016ddb6bf9e82c *R/BatchNormalisation.R
1667a816615648f7782c01bf98a7d7ce *R/BootstrapConfidenceInterval.R
30430a70b28534e404f61de124ea5711 *R/CheckArguments.R
fa673193982f51c593ea87d581425c9f *R/CheckHyperparameters.R
e03f09a53042e45d79dbbfd3d555e440 *R/CheckPackages.R
adf20e2648c4df26d371fa131e699f21 *R/ClassBalance.R
c52bd3896a8405ac0db4dc29b591c3cf *R/ClusterRepresentation.R
58818f6c5f648a659d91c7e5f99240d0 *R/Clustering.R
801773e8581f86e2d081a0e9d7da1567 *R/ClusteringMethod.R
927a6f8d3d71920e0221da2398d01e59 *R/CombatNormalisation.R
21b0308041fec69425fdf9043eff243e *R/DataObject.R
a0cf471afdb6462177dc474318bb9580 *R/DataParameterChecks.R
c529d05283bb996af4024572581d2ec8 *R/DataPreProcessing.R
8e11d543f82b42612618afe345af5090 *R/DataProcessing.R
6781b2209399165471da18c726132faa *R/DataServerBackend.R
24b51c425062ac9dbc26aed40ef30838 *R/ErrorMessages.R
58049ffcccc5ba3aa1a7574e2feb1b91 *R/ExperimentData.R
86c1e248f28144c360eb9a7fd4edc79c *R/ExperimentSetup.R
ce7035f10a520a638c4e4c29ca21edea *R/Familiar.R
12550a8cdf87045264062ea8e5466a8a *R/FamiliarCollection.R
4841ed9cb0d6028a04e5352d56ae125a *R/FamiliarCollectionExport.R
52c58d72e5cb4cda5487f0a81df6d26e *R/FamiliarData.R
639a90f504282de49ee387897e381eb4 *R/FamiliarDataComputation.R
c7da36e232428d46ab5796157e6fa5e6 *R/FamiliarDataComputationAUCCurves.R
f522a4a59e015ab8996daf56db1419a0 *R/FamiliarDataComputationCalibrationData.R
5efc331668cc5bbb5b944935bed8661a *R/FamiliarDataComputationCalibrationInfo.R
ff6c82b58d58b4d20a67f01873b53221 *R/FamiliarDataComputationConfusionMatrix.R
cc4f05a14e46ab2a55c6545f2fa50106 *R/FamiliarDataComputationDecisionCurveAnalysis.R
7a0b43659721bc5a83fce3ca6cd49497 *R/FamiliarDataComputationFeatureExpression.R
de051a7be5380bbd72a25ee652e84a42 *R/FamiliarDataComputationFeatureSimilarity.R
f8585cb5b65acd3bb59658cde7307ddd *R/FamiliarDataComputationHyperparameters.R
66b9345e0b2512956ba15d17a60030c8 *R/FamiliarDataComputationICE.R
a79edca55d9b16fd58442ac2d575a2c8 *R/FamiliarDataComputationModelPerformance.R
8beaa735d3970c3b05fc16e35db4a27d *R/FamiliarDataComputationPermutationVimp.R
7b9f4d05ce45d1e324fb58680698006e *R/FamiliarDataComputationPredictionData.R
e063df829d03955f15b17d5aec5fe137 *R/FamiliarDataComputationRiskStratificationData.R
1ce8bc228732de3f058823c249a367ce *R/FamiliarDataComputationRiskStratificationInfo.R
3626f24f2781a81260ccf1cb8a662e32 *R/FamiliarDataComputationSHAP.R
4693f1b70ae8647fd0252934035cbea4 *R/FamiliarDataComputationSampleSimilarity.R
1b47fcf330c576829465b97e95a39b35 *R/FamiliarDataComputationUnivariateAnalysis.R
e011dccd31a21663a373c7936ca91622 *R/FamiliarDataComputationUtilities.R
429db4ce23cff4a6bf0cd53f466342d7 *R/FamiliarDataComputationVimp.R
dfdff26bcae2fb608c3084e3df23c956 *R/FamiliarDataElement.R
7ecef5424330c40e7c61e258cd5a92f9 *R/FamiliarEnsemble.R
e1d04464f130a9664ec64d9298042a65 *R/FamiliarHyperparameterLearner.R
a29c66f090cd46dca3f85b826d91c303 *R/FamiliarModel.R
0725857b7cac204dc09e4c6963687171 *R/FamiliarNoveltyDetector.R
e8af592b576394b0a0672936a8d08ed6 *R/FamiliarObjectConversion.R
638e3fdd18ec78500a5d8b954d28ca04 *R/FamiliarObjectUpdate.R
3dda6eb7d49bad0688decb8c38858078 *R/FamiliarS4Classes.R
87724e1c072d09cbac1cbc4c688f5155 *R/FamiliarS4Generics.R
4314792ee4e5ef465bac26f5ff87d74c *R/FamiliarSharedS4Methods.R
0a4b18705bde330be6cf68cc128e948d *R/FamiliarVimpMethod.R
f861581a01b3a2b3968cacc479cfc064 *R/FeatureInfo.R
875ab26d23b1af2bb5d36c41b5902b83 *R/FeatureInfoParameters.R
34518f2ea0bf765f65328d8dfb7effdc *R/FunctionWrapperUtilities.R
e113fd1f4a6a8add971abe452b3a7598 *R/HyperparameterOptimisation.R
032dffbbaa6ebfa995b64d69a721fa46 *R/HyperparameterOptimisationMetaLearners.R
285db73c37fd8f558fb8af7b270d20e1 *R/HyperparameterOptimisationUtilities.R
f85cbdf25581ad9c98d91d5723f49b29 *R/HyperparameterS4BayesianAdditiveRegressionTrees.R
ed0c97a9be129aa31c24b8e89ded5931 *R/HyperparameterS4GaussianProcess.R
0f052ef803a3cfbb24666d48f93c6c4e *R/HyperparameterS4RandomSearch.R
1fdd30efb89da5be212e1bed97838495 *R/HyperparameterS4Ranger.R
faa956d571c897aa723d880a3ffe823b *R/Imputation.R
7da8ed90728ff91b483485f0b00bde47 *R/Iterations.R
1c47a2ff0487f5de821746c0d8b3d446 *R/LearnerMain.R
f09fc9f408bb9a3a88ae21eb6669f63b *R/LearnerRecalibration.R
38c7a0e6e27dfb20838dabd1cd4c28fb *R/LearnerRiskStratification.R
2d1e89ad61179efb9a9b77406f3e3731 *R/LearnerS4Cox.R
5c0fa45e00f658c1c9f6fe8b4e0ac150 *R/LearnerS4GLM.R
356dca7be72d79a113e2bbc9187fcb00 *R/LearnerS4GLMnet.R
7aa587495f58289929e1271639e0dc26 *R/LearnerS4KNN.R
c106c1dd340bf4d42f9b594d21aa62e5 *R/LearnerS4MBoost.R
9887f78c9f954290ab1c9034f2010b08 *R/LearnerS4Naive.R
7a5506a6aaeb5916e3b40a7da3288e56 *R/LearnerS4NaiveBayes.R
4c94ad42d7207a6229148826dbe6a648 *R/LearnerS4RFSRC.R
353098709d1d92049c5f675f20ee18c8 *R/LearnerS4Ranger.R
ea68cf006620248d763734874a3d94ca *R/LearnerS4SVM.R
67d3327ed3cd8a28d03d0cc718716d66 *R/LearnerS4SurvivalRegression.R
9cd6f9d0d3c0cc3a1694143bdf1ae542 *R/LearnerS4XGBoost.R
5c9ae632a20924a0c8655b49bf844d60 *R/LearnerSurvivalProbability.R
84caca3aa27bf9b2b328727093cc727a *R/Logger.R
dedbdca793e319199eb7bbd4256d97ae *R/MetricS4.R
a9be99a405811c351ed1673ce63acac1 *R/MetricS4AUC.R
70afe1f5fea500fe9f746d9d1a65b5e9 *R/MetricS4Brier.R
72bb41bf3f0b06e186f407b16d9a26c3 *R/MetricS4ConcordanceIndex.R
77afbc53b706906fa91d8186e6d54615 *R/MetricS4ConfusionMatrixMetrics.R
de36f329682faff37dca48892f4dccec *R/MetricS4Regression.R
b7d4c8565c5da6197a0c75cb4d5cf9f5 *R/Normalisation.R
bace8d1b396d8559994beda00388427a *R/NoveltyDetectorMain.R
ca3fc1fa64f4a60cda6cbde02f9987a1 *R/NoveltyDetectorS4IsolationTree.R
7f496745208ff525ee293090e11a3689 *R/NoveltyDetectorS4NoneNoveltyDetector.R
91adcb26ea215fca1f78864206bcd519 *R/OutcomeInfo.R
a83424c5cb09885e2e9c5391b7705b23 *R/PairwiseSimilarity.R
d7296c0733baaa97ae0f37977a2fccb0 *R/ParallelFunctions.R
fc532dedf6af51d63b04ebff088d5bd6 *R/ParseData.R
ba0b1e6b76ca838768cb339fa7ea8052 *R/ParseSettings.R
e1539dba5fe15f6c71a315915e2170ca *R/PlotAUCcurves.R
5b8010162e4dbd09368021d621754e86 *R/PlotAll.R
0e0e04f0659f70262efe5326645124f5 *R/PlotCalibration.R
ff9660b685e9439c84c25cbadb1b2541 *R/PlotColours.R
ead46e72bc541513673a9f3ba015889a *R/PlotConfusionMatrix.R
8e68d6807d9f2f84597cc01d366ec11e *R/PlotDecisionCurves.R
c038cd75cf9ae17081759f8b3e13a80f *R/PlotFamiliarPlot.R
d853c8fa94313ef4ef4258f24ff83ca7 *R/PlotFeatureRanking.R
f828152aaba77bc12a6036095b45e5c6 *R/PlotFeatureSimilarity.R
39e7aa49c8520c7c36305d8f9976f928 *R/PlotGTable.R
90fd6511c4ea46a84aa581360902bce5 *R/PlotICE.R
d964d814c97ef0dc71c182c0edcb28a8 *R/PlotInputArguments.R
b35edac59db291177da500f5871c87fe *R/PlotKaplanMeier.R
41352a60f8b70e63e8807a75e237482e *R/PlotModelPerformance.R
f133fad5a9e4a455b80556a360e6bae8 *R/PlotPermutationVariableImportance.R
aa2780be6e8639884a2bc74f24c6b92c *R/PlotSampleClustering.R
dc3faabdbfc69d81545176b605d0e241 *R/PlotShapDependence.R
49c3afc4b9d103c202f278c425597be1 *R/PlotShapForce.R
9697130d275f44b77edd51e30807f618 *R/PlotShapSummary.R
dd667fcf80dfbf66f26bd2e59af84b50 *R/PlotShapWaterfall.R
127a521f047e6f025d4038723854cd4e *R/PlotUnivariateImportance.R
7abcb7ff42c62820f3daede0cac1fd25 *R/PlotUtilities.R
71189f1714d1ac11560cd27c7c4f2337 *R/PredictS4Methods.R
f6c5151c172cb36695faf9fc26b9c09d *R/PredictionTable.R
8fa2ead7d21bacb41f4c1436b4605fd9 *R/ProcessTimeUtilities.R
1afc304447b3f12abe5209d234f20290 *R/Random.R
8d19eedacc54d62b34153f1a54da50dd *R/RankBordaAggregation.R
b93753239a7232118f5a4e7b572af0b3 *R/RankMain.R
60d5456b9ccc61d142478b0e740324da *R/RankSimpleAggregation.R
7cb1ecab3488b015dfc245cd99e26d60 *R/RankStabilityAggregation.R
074ab0a63dbb827a69a6e428765e585c *R/SocketServer.R
a6d61fa18b00ecbe40400a0490cdbbd9 *R/StringUtilities.R
5837dd46090eb7b8cf44b5f651efb2ac *R/TaskEvaluate.R
acef6462b55788a970a8e0f8d1e1a2ba *R/TaskFeatureInfo.R
693e100af9503729d7bc84863d80f091 *R/TaskLearn.R
ea53882ae79a906636dde6e6bab0f6aa *R/TaskLearnerHyperparameters.R
af3a088414bca877199cb19c773ab8dc *R/TaskMain.R
3c832e04fde3657ad401d100f11193d7 *R/TaskNoveltyDetector.R
d0afea41706496406780601dd1803b29 *R/TaskNoveltyDetectorHyperparameters.R
cb392e1227e612a13672dcaf9279efb2 *R/TaskVimp.R
d46a898d16eb3f91873d1ef94841e901 *R/TaskVimpHyperparameters.R
6bcc1bae16883438250518b2b5b19919 *R/TestDataCreators.R
09fb456e6a43c725cb6c4b6b7d397022 *R/TestFeatureInfo.R
b4803377b93f0160095262a911ecb66e *R/TestFunctions.R
1a670f4183250c3fa4c95c367b74a7f8 *R/TestTrain.R
b99d9efa8a3c6c8a732e79a80c6a10e0 *R/TestTrainNovelty.R
410f65d48de6d520fdf5e86eb445dc62 *R/TestVimp.R
a57c33f59ba276f9ad9976181475066c *R/Transformation.R
0b2fbb77d6d9472fb54590498a5ad59a *R/TrimUtilities.R
71dbcd48ef4e6074180142d32e516fe8 *R/Utilities.R
7c0efb11e3c836b4e264e51bd9b2c835 *R/UtilitiesS4.R
36020a96dc4ba10d8268c986002e614d *R/VimpMain.R
867be5e64217ac2f1991fa4e5582c8c4 *R/VimpS4Concordance.R
91ff35dc717390cc90597aae484d12c2 *R/VimpS4CoreLearn.R
cd75168200313be4311da06c69565b1c *R/VimpS4Correlation.R
a52068be7b60efa6f7ac84f76c36010f *R/VimpS4MutualInformation.R
c95f663695531e299c69dbfaea285b09 *R/VimpS4OtherMethods.R
054dd301f4a5f538c0c1a2dd9e3ed736 *R/VimpS4Regression.R
8e2b3bed30855be13de09f11878b5d87 *R/VimpTable.R
fd00f5d38bd1cddd3a215a3991cd9dc0 *R/aaa.R
9b275fec4e2c6d1f3b4f6d704753e3fa *build/vignette.rds
8497f128d9fd7935d188a1e6f0a6183a *inst/CITATION
2e866671c47d15f17dcec7438d369108 *inst/config.xml
e816a119e653e9cf67fdc924684f2133 *inst/doc/evaluation_and_explanation_precompiled.Rmd
ae33fd419d8b9f3bf2352e426901c7eb *inst/doc/evaluation_and_explanation_precompiled.html
d860705402b0270b31fa77e9782eae89 *inst/doc/introduction_precompiled.Rmd
4c80c845835c1abc42db1e88b3d3f708 *inst/doc/introduction_precompiled.html
fc35938a9e093facb3e37dbb0da264ac *inst/doc/learners_precompiled.Rmd
d1546dcab6401231eff526d5822a6c55 *inst/doc/learners_precompiled.html
4caf21be274c2618279c59ead190d414 *inst/doc/performance_metrics_precompiled.Rmd
55ab386adace59cfa28222ab0d530cb7 *inst/doc/performance_metrics_precompiled.html
64ca25eabe99c82bc212563368d24b6b *inst/doc/variable_importance_precompiled.Rmd
7b4971e253cc1265479090b32f6d0344 *inst/doc/variable_importance_precompiled.html
4a33bf0c31ae451691e0b0814b01b1c3 *man/aggregate_vimp_table-methods.Rd
e18fd50d57f906bb180433f0c528c1bc *man/as_data_object-methods.Rd
e367178da6155e54da5586cd35143110 *man/as_familiar_collection-methods.Rd
ba70dc68d37b0f4967e778fe5a16c28b *man/as_familiar_data-methods.Rd
4c80c0e5f18fae8c7cd4232b673119bc *man/as_familiar_ensemble-methods.Rd
27003cfdf2b342f742815229b60daf15 *man/as_prediction_table.Rd
3448a313e882504e6cfecae6f6f716db *man/coef-methods.Rd
3c76119edac1c4bdbcfe208cdd11b064 *man/dataObject-class.Rd
0f0324c9613012e4524438ae40967ac3 *man/delayedDataObject-class.Rd
ea8c3a3e96a76c864a34574bb587e9c3 *man/dot-calibration_create_randomised_groups.Rd
5dd0d618416620023ba91bfd94cd2240 *man/dot-check_class_level_plausibility.Rd
8971ec87ee2f1eb6931daa2e0db6c15c *man/dot-check_feature_availability.Rd
ec6ffedf4c79c3cb4a7830c78691a437 *man/dot-check_input_identifier_column.Rd
87e3d8d76936a44509631f455424a033 *man/dot-check_input_plot_args.Rd
39ebc2e45edbccde334d7e413634cba8 *man/dot-check_outcome_type_plausibility.Rd
e0e3746636a497ab2de76ba215a005e3 *man/dot-check_plot_splitting_variables.Rd
3ec019ac7fce5c837661e711ad417a81 *man/dot-check_survival_time_plausibility.Rd
7e8db48ac383a1e7ead5319bb8bb0f40 *man/dot-extract_data.Rd
8f65cda5c2d0be62ab98838de2456fc7 *man/dot-finish_data_preparation.Rd
e7cc76b3d9c2477965586510a5a751fc *man/dot-get_default_sign_size.Rd
be04bbd577eb8d8825bc8d557049f3b5 *man/dot-get_iteration_data.Rd
e6ac7a97f2ed4ecf5f030f8ecb4b092a *man/dot-impute_outcome_type.Rd
01cb7fcc957fead16bd8e120d74067c3 *man/dot-load_iterations.Rd
99ffde6cb4d16ed61b3fee7288d9aed5 *man/dot-parse_categorical_features.Rd
1ad0d03766ac8407ca1abaf26be06467 *man/dot-parse_evaluation_settings.Rd
a9d96e68384cab04bf90e0d82a17a03f *man/dot-parse_experiment_settings.Rd
010233599477629c93f4c576f6bac69a *man/dot-parse_file_paths.Rd
fea07aba02a29d40cd4eb5fe80fd0c12 *man/dot-parse_general_settings.Rd
dccdc84e57be06f8c00e028fb5b6d4b7 *man/dot-parse_hyperparameter_optimisation_settings.Rd
ed747f483196276835fe6a5f205317e7 *man/dot-parse_initial_settings.Rd
dff6e42b6ac6acfd3e5006f6ed7a534d *man/dot-parse_integer_features.Rd
aa022ab3cdb693f1b616b1df6e31277c *man/dot-parse_model_development_settings.Rd
c6f4ab9a4c163638d7dfd2ac56e6891f *man/dot-parse_preprocessing_settings.Rd
c47753b7bb9f845ddb1e46cb7eecf20a *man/dot-parse_setup_settings.Rd
5eb4fae879d72919720435ab43b9da9b *man/dot-parse_variable_importance_settings.Rd
85f2069cf1564ae996dbc5cf392abcd5 *man/dot-plot_permutation_variable_importance.Rd
6f7a97d13d45f7e38f38fb8e77fb5562 *man/dot-plot_univariate_importance.Rd
b481fe340853e746b361298ed6d17820 *man/dot-update_experimental_design_settings.Rd
70df0f7dd245129cd8adaf8275fb3a69 *man/dot-update_initial_settings.Rd
566603971b1cbacecdca3e54a002b0ef *man/encapsulate_path.Rd
705657b3ff670cfffd6813c15f21755b *man/experimentData-class.Rd
91a44ecfa4a228ae39beeb3c3f12db50 *man/export_all-methods.Rd
864ed4039f3042891f74870e50310112 *man/export_auc_data-methods.Rd
8acd2840931d8bebb2a9f4e782c842ed *man/export_calibration_data-methods.Rd
0d92d462a21ce9682025e6b8fa61f6fc *man/export_calibration_info-methods.Rd
b50a22445f02dbf2581c032a169feb31 *man/export_confusion_matrix_data-methods.Rd
176b53ce4dfacbd3c7ec22c902457107 *man/export_decision_curve_analysis_data-methods.Rd
e25e5850a0634942329f0f32a68a44a7 *man/export_feature_expressions-methods.Rd
375c6cc8b8e17036d0f460c1e1b17aef *man/export_feature_similarity-methods.Rd
5d9a6066eefebc2465f6fc010ef93f70 *man/export_fs_vimp-methods.Rd
4d8e97b9f90a60cb78d38e5a0a0aaee9 *man/export_hyperparameters-methods.Rd
3ca352ce9c9c905ab6622a9947221258 *man/export_ice_data-methods.Rd
b434f5722ab1bf1db067e22fad624ef0 *man/export_model_performance-methods.Rd
b846716d4a8bd141b7ee9af06a41f424 *man/export_model_vimp-methods.Rd
ac23611e835dbf0fa2d7997e6abff10a *man/export_partial_dependence_data-methods.Rd
16d6d7af12d748ec846821530d919b6b *man/export_permutation_vimp-methods.Rd
63aad92ffd58be8f15d5e85fa0efd451 *man/export_prediction_data-methods.Rd
8f10b89d9cc37b0c651543e5984227a8 *man/export_risk_stratification_data-methods.Rd
db9eb5214f7b20040e22782994a35ebd *man/export_risk_stratification_info-methods.Rd
d189367dea861fd11feccb8bc3b95cd6 *man/export_sample_similarity-methods.Rd
edb9c0751f6cd485f7fa7cfb23891236 *man/export_shap-methods.Rd
d22c6825246f5a22fa6256be7eab5c07 *man/export_univariate_analysis_data-methods.Rd
bdf2227a27f367bcf31c66fd6fd68334 *man/extract_auc_data.Rd
3af621100b8fbde257ddcdadde63e120 *man/extract_calibration_data.Rd
688e8b4cbc28279e8919f957c102cab7 *man/extract_calibration_info.Rd
9a31c63a4b705838eb9ee51f56170041 *man/extract_confusion_matrix.Rd
93e3fa0c6961ba9856a7d7b3118b6066 *man/extract_decision_curve_data.Rd
a45db170c9a936dba90e4c75eb645c93 *man/extract_dispatcher-familiarEnsemble-familiarDataElement-method.Rd
feae9ae1331f946c78836485a7c99c94 *man/extract_experimental_setup.Rd
aba891a4dd8d746970a67438123eef5b *man/extract_feature_expression.Rd
47f3dc1dc2ebb9ccc1e05f2110c3aba4 *man/extract_feature_similarity.Rd
1aea42ffc606270de5a51ecb0f1e493e *man/extract_fs_vimp.Rd
20bb4c8211760e2bdd1a6f56cc6c3207 *man/extract_hyperparameters.Rd
712da19fd172dd64ac1506269e1626ab *man/extract_ice.Rd
6c24daf864f12d61c4a2607b9593a075 *man/extract_model_vimp.Rd
eae37f67cae04836bf2421a538b8cabc *man/extract_performance.Rd
74b379bcb38978cb0d33fafb9443f7f7 *man/extract_permutation_vimp.Rd
df787c79a85c1698700cc5f5832e3a3b *man/extract_predictions.Rd
528ddb849b209464de08d4ae98688349 *man/extract_risk_stratification_data.Rd
402d4d5a50ff63c92c4343cc3281a323 *man/extract_risk_stratification_info.Rd
9e8d9f2c39be7c59de3200ab7b244d92 *man/extract_sample_similarity.Rd
a04d48f78c73a75f6149a07378f94cbc *man/extract_shap.Rd
42be931a6c700b1c78f3d0d47f8fc9d2 *man/extract_univariate_analysis.Rd
f401ee38ecb9eee100bf03e0d45dfc3b *man/familiar.Rd
d0b3eeff5de04a79a0268aae59d89c2b *man/familiarCollection-class.Rd
6be5dd3c6741f8014ad35ae3ef570001 *man/familiarData-class.Rd
f0f89b380b95ed0bfb0f341ee7bc39c5 *man/familiarDataElement-class.Rd
bed5f5ab456472a2db64375365554cc7 *man/familiarEnsemble-class.Rd
fe28eccb8ffb366fbaddd26b65999741 *man/familiarHyperparameterLearner-class.Rd
8ddb3d9069f0dc1ecded22c11c1022f7 *man/familiarMetric-class.Rd
73a6c3af099bb0aead117508561b7cfb *man/familiarModel-class.Rd
f651a6e5a5b80ac948b7c1b1d5394e2c *man/familiarNoveltyDetector-class.Rd
8961f3315268a40aed9259a0bdd34c40 *man/familiarVimpMethod-class.Rd
9aac879654b1a7beb8a5eb9bd737670c *man/featureInfo-class.Rd
97fc2cb5c4b12d47b0a6abfd1f8e9039 *man/featureInfoParameters-class.Rd
11df082f5a002705bb6f9885b57b6652 *man/get_class_names-familiarCollection-method.Rd
00dd2640e3965182c58b5dcc6f220612 *man/get_data_set_names-familiarCollection-method.Rd
a951041a61e17f8d5d680b5babc4bf23 *man/get_feature_names-familiarCollection-method.Rd
e07d02ec8449e991c00bb1ca90e79586 *man/get_learner_names-familiarCollection-method.Rd
a9adb140b1b5f5553d90952a9bf06481 *man/get_risk_group_names-familiarCollection-method.Rd
04a974000b35abc991ff546c863b3b38 *man/get_vimp_method_names-familiarCollection-method.Rd
99afa8ffa2fca2f4fadd30d9c871d19b *man/get_vimp_table-methods.Rd
481aaf6a9ba05180f4d0b41efcac4754 *man/get_xml_config.Rd
199212538460a907a249c039a11d2432 *man/is.encapsulated_path.Rd
93dee1b8a9973c6e6b9458b17c389420 *man/is.waive.Rd
626157cc42c0af2f42ad781219a23fb9 *man/outcomeInfo-class.Rd
a28f070933dc41fa5d3229b79f998461 *man/plot_auc_precision_recall_curve-methods.Rd
9b6d74c9b3dc123a773524016d7c8343 *man/plot_auc_roc_curve-methods.Rd
bacfd37fbd99fbe84e7338f32fba3052 *man/plot_calibration_data-methods.Rd
dc564478a94c32f437198a5a98c72594 *man/plot_confusion_matrix-methods.Rd
6221208c3076f4f382079ddceea76162 *man/plot_decision_curve-methods.Rd
60cdd3da07c607a5a3546358d62b33f7 *man/plot_feature_similarity-methods.Rd
f392132ccf64dd15b7ba6e4531a523b4 *man/plot_ice-methods.Rd
e8c4cf1c2f911d22442b27fa800abc0b *man/plot_kaplan_meier-methods.Rd
0b806d313d67b8bff5bcd9e94c135124 *man/plot_model_performance-methods.Rd
51178867e6b5a6d487f53d29542b6a29 *man/plot_pd-methods.Rd
0d79ef2a6cae4f8140cd654221fe1a38 *man/plot_permutation_variable_importance-methods.Rd
9e701e74bac202d59b1785b4328db1c1 *man/plot_sample_clustering-methods.Rd
198ca90305bc35934385c4935cea8a7f *man/plot_shap_dependence-methods.Rd
2722a9a8db5a3f26091dbf0f3d447aa3 *man/plot_shap_force-methods.Rd
84bfaf439f1dac4fb47536290b138843 *man/plot_shap_summary-methods.Rd
4748de30f197b3b5ffac0f3072e6d61a *man/plot_shap_waterfall-methods.Rd
8d0895ec78a4af3f103ed099060f47b7 *man/plot_univariate_importance-methods.Rd
14afc6b563978761f59db0afaf219bee *man/plot_variable_importance-methods.Rd
6fddfad0364cd94cef9e81263b83d374 *man/precompute_data_assignment.Rd
20700f74c909b47cff661039fc3dce03 *man/precompute_feature_info.Rd
911f9ad5e0ddea8208d2104c8b26ffd3 *man/precompute_vimp.Rd
eb3de37c7eb4ccd3b1d30f57dd3ec9e6 *man/predict-methods.Rd
5699d93c7e2a4401db9e392ad20bd233 *man/set_class_names-familiarCollection-method.Rd
29e25b32000f8f239438108faef000ca *man/set_data_set_names-familiarCollection-method.Rd
80fbdb3cc506de102001f3055f1ae617 *man/set_feature_names-familiarCollection-method.Rd
b3c9c013227ed38d7c2bb00d536da9dc *man/set_learner_names-familiarCollection-method.Rd
685f88f49c189844a53761af08ea1b70 *man/set_object_name-familiarData-method.Rd
ee027a11c08729d4a65b54e3d0da92a1 *man/set_object_name-familiarEnsemble-method.Rd
2a72e0d5fd4a73e6a8b0c966f194183a *man/set_object_name-familiarModel-method.Rd
11eb0880fbdb6ac16fb17be178cc465f *man/set_object_name-familiarNoveltyDetector-method.Rd
c33330db939cba3d2313b9dac469c4d1 *man/set_risk_group_names-familiarCollection-method.Rd
d57ba5e9a5a87a79a5cadaeb31cbf48f *man/set_vimp_method_names-familiarCollection-method.Rd
448ff4e9a3fc25b76ec42846243dd944 *man/summary-methods.Rd
98fa141f2b27d62e57e18749b87d3d02 *man/summon_familiar.Rd
c146a0c911cb798369586132bd05032e *man/theme_familiar.Rd
f0dd87bd81ef7193038d53177c57c861 *man/train_familiar.Rd
7e06d166e77b4caac1a5716800282ba1 *man/update_model_dir_path-methods.Rd
ebbf79eb2567cb7079ed56d130909915 *man/update_object-methods.Rd
285768113f3acd893ff3a6c83b5202ef *man/vcov-methods.Rd
c47cea9f11ef2ecdeb3004fe80cee2dc *man/vimpTable-class.Rd
093ed9db4a08bcc9a285df8834d59c9a *man/waiver.Rd
51b9dbb32e4bba49860906a043cc137c *tests/testthat.R
d62111130071408fcf55ced2929ae250 *tests/testthat/test-0_parallel_backend.R
558ccf2c019be4c75bb1ec8ae4164978 *tests/testthat/test-0_plot_calibration.R
060a15f25753e5ef920b85298ba26cb7 *tests/testthat/test-0_preprocessing_clustering.R
24b21bddb554e6062048748f4d345b53 *tests/testthat/test-apply.R
8fe9329705412760e2619ee7cfe37071 *tests/testthat/test-as_data_object.R
b00d833254575cc73f16946d4f226ce5 *tests/testthat/test-batch_normalisation.R
11869ba7d1feecb280f53e9b265fdf67 *tests/testthat/test-batch_normalisation_checks.R
58bbd3f6a28bc7e5d38af29cb750b8e6 *tests/testthat/test-check_data_plausibility.R
4ec04117bd61de654bb7b0a858c2a921 *tests/testthat/test-collection_labels.R
3fb0e5d7ae59c89a2f0131f7a8dec7f3 *tests/testthat/test-configuration_file.R
6abef754125b37ef3d3c8e6fd595066f *tests/testthat/test-dynamic_model_loading.R
cccfb5380ab352abf688cf265f20e18a *tests/testthat/test-experiment_data.R
c14ce94d2f07b49d1425c17d8c8789a5 *tests/testthat/test-experimental_design.R
5ec68361181b656f35c9425a17000902 *tests/testthat/test-experimental_design_external_validation.R
32cdae2468c5d27436c216502bbeb806 *tests/testthat/test-experimental_design_no_external_validation.R
54f99f1febfd34ea546f6eee7d2640fe *tests/testthat/test-experimental_design_unpooled_collection.R
7f612a6fa1a56b7eac1d0ebef32e3497 *tests/testthat/test-export_calibration_info.R
63980a5443fcbe86772d7751fd2058a3 *tests/testthat/test-export_hyperparameters.R
38e578c0413ca0a0d1a1b360b22b8637 *tests/testthat/test-export_ice.R
0b6e52e1843a4f337564784cd39d983f *tests/testthat/test-export_model_performance.R
5a1570162acd3c27ccad99c53da9dbf9 *tests/testthat/test-export_permutation_vimp.R
8e69a88e721ac767061a08bfa6338098 *tests/testthat/test-export_prediction_data.R
e4d2f02243a752e04ae334478c225fe0 *tests/testthat/test-export_risk_stratification_info.R
b30c3295b1f28932e5cb70cb1623fe0b *tests/testthat/test-export_sample_clustering.R
9d8dd7847768e81b24e6a3876303db61 *tests/testthat/test-export_shap.R
91156cc9eaaf6ce368e327cf97f3ffa8 *tests/testthat/test-familiar_data_creation.R
219071584c4fefb993e69d3eabc8c4ee *tests/testthat/test-function_wrappers.R
e8e7736c5f6b0c7fef35af8b686fde84 *tests/testthat/test-general_normalisation.R
a8c59c3c8235e9d96c7dad774e05b350 *tests/testthat/test-hyperparameter_optimisation.R
4151e6988e3c2f5654ca0544a9a7231b *tests/testthat/test-imputation.R
5ddfeefc7523135fb4a450ac439b1eac *tests/testthat/test-iteration_seed.R
2c45c2933cff878ec67c3c734a1a6422 *tests/testthat/test-learner_cox_s4.R
f9a3f294eb4814094805bb7fbd0d96b4 *tests/testthat/test-learner_glm_S4.R
7e51d4e709950c04dec5a0f13b4e63fe *tests/testthat/test-learner_glmnet_S4.R
2dcc02372985bafbc747ea32d9c819bd *tests/testthat/test-learner_knn_S4.R
cdbc015282dfb7108fadda227693fb7d *tests/testthat/test-learner_naive_bayes_S4.R
8fe6248b592c13d52b5db87ee7490c46 *tests/testthat/test-learner_ranger_s4.R
308970ad4d1cfb78cfe3aa84bb36d93f *tests/testthat/test-learner_rfsrc_s4.R
f093a89d73f73693f67b8c62f353c5b0 *tests/testthat/test-learner_survival_regression_S4.R
519fcdaba8c1bbf750b2835b86eeb6c5 *tests/testthat/test-learner_svm_S4.R
c52be55390913cf0be660f1579f4b433 *tests/testthat/test-learner_xgboost_dart_S4.R
65b9697d9fd03f573bf8a6bea42c3b66 *tests/testthat/test-learner_xgboost_lm_S4.R
e0cc86b0b62cb22024d01447a013fa7b *tests/testthat/test-learner_xgboost_tree_S4.R
95287ff92fd3e8d79ef8d5a14acbc69e *tests/testthat/test-leave_one_out_cv.R
9496c54e5810efad1e50f42299f1e037 *tests/testthat/test-metric_auc_roc_S4.R
3991c06aa38c14a7a4f28f90d87a9b5a *tests/testthat/test-metric_brier_S4.R
b671e53537137230e89fabde32fbd9a3 *tests/testthat/test-metric_concordance_index_S4.R
38ee75251067e29c7b948022bb5a9c2e *tests/testthat/test-metric_confusion_matrix_metrics_S4.R
31c98e81481b9ca465de8975502f0765 *tests/testthat/test-metric_regression_S4.R
0edc9d61e66cfd239ee8d7ad592a96f6 *tests/testthat/test-multi_learner_vimp.R
b097d359f2f2c70f71b0ee71dc0a7ae9 *tests/testthat/test-naive_model.R
42f2d5d03e22f202e2ecc8129c56e448 *tests/testthat/test-novelty_isolation_forest_S4.R
e86019a233adcbfb4068219311d0335b *tests/testthat/test-novelty_none_S4.R
aa3f017d6a3c14bc86e011d93f86d6a6 *tests/testthat/test-object_conversion.R
623884b80a1af1801cda06a9a13b5d38 *tests/testthat/test-plot_auc_curves.R
daf77be0b700dec8b554b604cbaf42c2 *tests/testthat/test-plot_confusion_matrix.R
4a174761fa30c57f3320a146f8574589 *tests/testthat/test-plot_decision_curve.R
115decd031f075cf4bee0c4157ad1954 *tests/testthat/test-plot_feature_similarity.R
964fb4e06551ac3bd4651eaf390d4acc *tests/testthat/test-plot_ice_a.R
4c79fce852bddca3d2e117aa9793d7b5 *tests/testthat/test-plot_ice_b.R
13d9427a70cd47ebe109db261d43dba6 *tests/testthat/test-plot_kaplan_meier_curve.R
a4bd5ec21377ca1f6f26f9e0c5f8db8c *tests/testthat/test-plot_model_performance.R
828aecdb04f9a977937d3f319b034628 *tests/testthat/test-plot_model_ranks.R
f6ca855f9fc5fa8e241050cffa9aa075 *tests/testthat/test-plot_permutation_variable_importance.R
635d624d2e2ecd3d6ac17354ea013b46 *tests/testthat/test-plot_sample_clustering_a.R
613c095e8fb551358e2078b35cf3e7f1 *tests/testthat/test-plot_sample_clustering_b.R
d5ff5e0467bb89a82536bd7699273824 *tests/testthat/test-plot_shap_dependence.R
65ec4e7b99e689bf7a0b1fe87512f83c *tests/testthat/test-plot_shap_force.R
d88219b33c988550241516a05949fe34 *tests/testthat/test-plot_shap_summary.R
49a2c32118f51dbfec5bf25a3562bd25 *tests/testthat/test-plot_shap_waterfall.R
84e80d341092484132f52e7fae1a3bbc *tests/testthat/test-plot_univariate_importance.R
4d607d4678ee148b4533b2a3011aaba7 *tests/testthat/test-predict_method.R
716021514fdcc852c74a27beb5c65b0a *tests/testthat/test-predict_survival_probability.R
386c0b0607e3e2dfc45d71cea903efd0 *tests/testthat/test-process_time.R
a7aaa68ec8404cbb2fd086a99be9046f *tests/testthat/test-rank_aggregation_methods.R
0253d129ef9257e22c978c258546fbac *tests/testthat/test-sample_weights.R
1b1e5b20b2ab6789a8187a4cd924d78f *tests/testthat/test-stratification.R
ae897973a63983a44e8cabd0977a2eb6 *tests/testthat/test-subsampling_functions.R
db0c130c86ef9fb6a06653dac61b2804 *tests/testthat/test-task_based_workflow.R
91fce71807159b564010e42d4b8ff6e0 *tests/testthat/test-train_familiar.R
182ed1a9d4201e6ad2073fe4d1a0d654 *tests/testthat/test-transformation.R
46004d546e5666a44e2b4ac790a1e1a5 *tests/testthat/test-update_object.R
2749ef2a89ec18a1540af779c4aea562 *tests/testthat/test-vignette_introduction.R
d1ac59ed1ae01484d8a2f929ac210d6a *tests/testthat/test-vimp_concordance_S4.R
37504f7d95e3953a1ed769f68e4e20d2 *tests/testthat/test-vimp_corelearn_S4.R
52822035f8847acf14471ab65abc6aa6 *tests/testthat/test-vimp_correlation_S4.R
988848eda983458157c7a4fc176a3ed2 *tests/testthat/test-vimp_glmnet_S4.R
5af9d3abe1a4a72d76a157dcd30ce739 *tests/testthat/test-vimp_mutual_information_S4.R
e20c48f0dfd4b2745766035f01485005 *tests/testthat/test-vimp_ranger_S4.R
5d4294d14568f6c21cc15539405f486c *tests/testthat/test-vimp_regression_S4.R
cd8e19c4a732d9d765d67a0f282d7d9d *tests/testthat/test-vimp_rfsrc_S4.R
5175f893a1e051056c04a6b6d3d28b16 *tests/testthat/test-vimp_table.R
ec8a466729574b8bf747a24f30f9e1dd *vignettes/CC4_0_BY_88x31.png
4fff8770c939b1fe3137d0179c096422 *vignettes/eval_and_explain/auc-pr-curve-bci-1.png
4c31046cc20b52e9c30cb22d5694742d *vignettes/eval_and_explain/auc-pr-curve-point-1.png
2d9540bd433a2e3dc5ca22d05c5ef694 *vignettes/eval_and_explain/auc-roc-curve-bci-1.png
e8a3e1d0529c126832fdd7fc5abacf60 *vignettes/eval_and_explain/auc-roc-curve-point-1.png
ac212d85f80d125448998ac211f90111 *vignettes/eval_and_explain/calibration-data-bci-1.png
ca1200e7ea11b63ff092a13dd499e098 *vignettes/eval_and_explain/calibration-data-point-1.png
f957faf9d4375291a2d73b9b5ad4090c *vignettes/eval_and_explain/confusion-matrix-1.png
72b33901317b68b6fddd09c7ebed7cb2 *vignettes/eval_and_explain/decision-curve-bci-1.png
c8f8f29d3e99f078e03141750f443919 *vignettes/eval_and_explain/feature-similarity-1.png
d7fb5df44fec849547d08a0690aaab3b *vignettes/eval_and_explain/ice-2d-1.png
2f57930e5852d638c15dce36c8fc7932 *vignettes/eval_and_explain/ice-2d-anchored-1.png
407ba4b14353f2c36e033608dc2886cc *vignettes/eval_and_explain/ice-max-remodeling-ratio-1.png
c7848e34646a4294aa42c73cadc074e7 *vignettes/eval_and_explain/ice-max-remodeling-ratio-anchored-1.png
903c272577afb1acd08ab29106dd03ae *vignettes/eval_and_explain/kaplan-meier-plot-1.png
d54167d05b352018792782c21a3b3dcf *vignettes/eval_and_explain/model-performance-plot-1.png
d54167d05b352018792782c21a3b3dcf *vignettes/eval_and_explain/model-performance-plot-standalone-1.png
5fedcb31453a6bf44dae21616e2dc4ea *vignettes/eval_and_explain/model-variable-importance-1.png
25bf4f45b4f13cf9801e8a44395c9996 *vignettes/eval_and_explain/permutation-variable-importance-bc-1.png
bdba18ba431ca846840cdc6992f70c1f *vignettes/eval_and_explain/sample-similarity-1.png
f5896d799e7f24dde39af357368cd607 *vignettes/eval_and_explain/sample-similarity-unnormalised-1.png
db5cb920ae1910218eb540a63be06327 *vignettes/eval_and_explain/shap-dependence-1.png
18951152c89f275fc1a6c049497c4446 *vignettes/eval_and_explain/shap-dependence-interaction-1.png
868f3a69673d2adb796f2791ab9af6c8 *vignettes/eval_and_explain/shap-dependence_interaction_2-1.png
ab90f1b0fe1da3513ed3468e8e90bb32 *vignettes/eval_and_explain/shap_force_plot-1.png
4f99400981127051708db72e5dcbe14f *vignettes/eval_and_explain/shap_force_plot_highlight-1.png
4d482a88b5049213170af7e3fdfa20c9 *vignettes/eval_and_explain/shap_summary-1.png
f668859bc656e1f52723fcfae8c95300 *vignettes/eval_and_explain/shap_summary_bar-1.png
85916132e1920690d6e8e4e849ec981d *vignettes/eval_and_explain/shap_summary_violin-1.png
a609ffedd69df9f16f9d8886404db0c1 *vignettes/eval_and_explain/shap_waterfall-1.png
e816a119e653e9cf67fdc924684f2133 *vignettes/evaluation_and_explanation_precompiled.Rmd
f59fba7d59a3da2a700e01f74fad24db *vignettes/familiar.svg
41fbb3b48ce127f49a64be593bcf2939 *vignettes/familiar_logo.html
d860705402b0270b31fa77e9782eae89 *vignettes/introduction_precompiled.Rmd
fc35938a9e093facb3e37dbb0da264ac *vignettes/learners_precompiled.Rmd
a05b11ae8a6026b6340716e74bd4e18b *vignettes/license.html
4caf21be274c2618279c59ead190d414 *vignettes/performance_metrics_precompiled.Rmd
1dafbd09831c0bd04084f263e5b81983 *vignettes/refs.bib
64ca25eabe99c82bc212563368d24b6b *vignettes/variable_importance_precompiled.Rmd
