Af_add_node_feature	Af_add_node_feature
Af_build	Af_build
Af_cluster_metrics	Af_cluster_metrics
Af_cluster_node_features	Af_cluster_node_features
Af_compare_across_repertoires	Af_compare_across_repertoires
Af_compare_methods	Af_compare_methods
Af_compare_PLM	Af_compare_PLM
Af_compare_within_repertoires	Af_compare_within_repertoires
af_default	af_default
Af_distance_boxplot	Af_distance_boxplot
Af_distance_scatterplot	Af_distance_scatterplot
Af_edge_RMSD	Af_edge_RMSD
Af_get_sequences	Af_get_sequences
Af_metrics	Af_metrics
af_mst	af_mst
af_nj	af_nj
Af_node_size_boxplot	Af_node_size_boxplot
Af_PLM_dataframe	Af_PLM_dataframe
Af_plot_PLM	Af_plot_PLM
Af_plot_PLM_mut_vs_cons	Af_plot_PLM_mut_vs_cons
Af_plot_tree	Af_plot_tree
Af_sync_nodes	Af_sync_nodes
Af_to_newick	Af_to_newick
calculate_GBLD	calculate_GBLD
compare_repertoire	compare_repertoire
igraph_to_phylo	igraph_to_phylo
newick_to_Af	newick_to_Af
PLM_dataframe	PLM_dataframe
small_af	small_af
small_vdj	small_vdj
VDJ_3d_properties	VDJ_3d_properties
VDJ_import_IgBLAST_annotations	VDJ_import_IgBLAST_annotations
VDJ_integrate_bulk	VDJ_integrate_bulk
VDJ_to_AIRR	VDJ_to_AIRR
