'DataSHIELD' Client Side Base Functions

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Documentation for package ‘dsBaseClient’ version 6.3.5

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D

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ds.abs Computes the absolute values of a variable
ds.asCharacter Converts a server-side R object into a character class
ds.asDataMatrix Converts a server-side R object into a matrix
ds.asFactor Converts a server-side numeric vector into a factor
ds.asFactorSimple Converts a numeric vector into a factor
ds.asInteger Converts a server-side R object into an integer class
ds.asList Converts a server-side R object into a list
ds.asLogical Converts a server-side R object into a logical class
ds.asMatrix Converts a server-side R object into a matrix
ds.asNumeric Converts a server-side R object into a numeric class
ds.assign Assigns an R object to a name in the server-side
ds.auc Calculates the Area under the curve (AUC)
ds.Boole Converts a server-side R object into Boolean indicators
ds.boxPlot Draw boxplot
ds.boxPlotGG Renders boxplot
ds.boxPlotGG_data_Treatment Take a data frame on the server side an arrange it to pass it to the boxplot function
ds.boxPlotGG_data_Treatment_numeric Take a vector on the server side an arrange it to pass it to the boxplot function
ds.boxPlotGG_numeric Draw boxplot with information from a numeric vector
ds.boxPlotGG_table Draw boxplot with information from a data frame
ds.bp_standards Calculates Blood pressure z-scores
ds.c Combines values into a vector or list in the server-side
ds.cbind Combines R objects by columns in the server-side
ds.changeRefGroup Changes the reference level of a factor in the server-side
ds.class Class of the R object in the server-side
ds.colnames Produces column names of the R object in the server-side
ds.completeCases Identifies complete cases in server-side R objects
ds.contourPlot Generates a contour plot
ds.cor Calculates the correlation of R objects in the server-side
ds.corTest Tests for correlation between paired samples in the server-side
ds.cov Calculates the covariance of R objects in the server-side
ds.dataFrame Generates a data frame object in the server-side
ds.dataFrameFill Creates missing values columns in the server-side
ds.dataFrameSort Sorts data frames in the server-side
ds.dataFrameSubset Sub-sets data frames in the server-side
ds.densityGrid Generates a density grid in the client-side
ds.dim Retrieves the dimension of a server-side R object
ds.dmtC2S Copy a clientside data.frame, matrix or tibble to the serverside
ds.elspline Basis for a piecewise linear spline with meaningful coefficients
ds.exists Checks if an object is defined on the server-side
ds.exp Computes the exponentials in the server-side
ds.extractQuantiles Secure ranking of a vector across all sources and use of these ranks to estimate global quantiles across all studies
ds.forestplot Forestplot for SLMA models
ds.gamlss Generalized Additive Models for Location Scale and Shape
ds.getWGSR Computes the WHO Growth Reference z-scores of anthropometric data
ds.glm Fits Generalized Linear Model
ds.glmerSLMA Fits Generalized Linear Mixed-Effect Models via Study-Level Meta-Analysis
ds.glmPredict Applies predict.glm() to a serverside glm object
ds.glmSLMA Fit a Generalized Linear Model (GLM) with pooling via Study Level Meta-Analysis (SLMA)
ds.glmSummary Summarize a glm object on the serverside
ds.heatmapPlot Generates a Heat Map plot
ds.hetcor Heterogeneous Correlation Matrix
ds.histogram Generates a histogram plot
ds.igb_standards Converts birth measurements to intergrowth z-scores/centiles
ds.isNA Checks if a server-side vector is empty
ds.isValid Checks if a server-side object is valid
ds.kurtosis Calculates the kurtosis of a numeric variable
ds.length Gets the length of an object in the server-side
ds.levels Produces levels attributes of a server-side factor
ds.lexis Represents follow-up in multiple states on multiple time scales
ds.list Constructs a list of objects in the server-side
ds.listClientsideFunctions Lists client-side functions
ds.listDisclosureSettings Lists disclosure settings
ds.listServersideFunctions Lists server-side functions
ds.lmerSLMA Fits Linear Mixed-Effect model via Study-Level Meta-Analysis
ds.log Computes logarithms in the server-side
ds.look Performs direct call to a server-side aggregate function
ds.ls lists all objects on a server-side environment
ds.lspline Basis for a piecewise linear spline with meaningful coefficients
ds.make Calculates a new object in the server-side
ds.matrix Creates a matrix on the server-side
ds.matrixDet Calculates de determinant of a matrix in the server-side
ds.matrixDet.report Returns matrix determinant to the client-side
ds.matrixDiag Calculates matrix diagonals in the server-side
ds.matrixDimnames Specifies the dimnames of the server-side matrix
ds.matrixInvert Inverts a server-side square matrix
ds.matrixMult Calculates tow matrix multiplication in the server-side
ds.matrixTranspose Transposes a server-side matrix
ds.mdPattern Display missing data patterns with disclosure control
ds.mean Computes server-side vector statistical mean
ds.meanByClass Computes the mean and standard deviation across categories
ds.meanSdGp Computes the mean and standard deviation across groups defined by one factor
ds.merge Merges two data frames in the server-side
ds.message Returns server-side messages to the client-side
ds.metadata Gets the metadata associated with a variable held on the server
ds.mice Multivariate Imputation by Chained Equations
ds.names Return the names of a list object
ds.ns Generate a Basis Matrix for Natural Cubic Splines
ds.numNA Gets the number of missing values in a server-side vector
ds.qlspline Basis for a piecewise linear spline with meaningful coefficients
ds.quantileMean Computes the quantiles of a server-side variable
ds.ranksSecure Secure ranking of a vector across all sources
ds.rbind Combines R objects by rows in the server-side
ds.rBinom Generates Binomial distribution in the server-side
ds.recodeLevels Recodes the levels of a server-side factor vector
ds.recodeValues Recodes server-side variable values
ds.rep Creates a repetitive sequence in the server-side
ds.replaceNA Replaces the missing values in a server-side vector
ds.reShape Reshapes server-side grouped data
ds.rm Deletes server-side R objects
ds.rNorm Generates Normal distribution in the server-side
ds.rowColCalc Computes rows and columns sums and means in the server-side
ds.rPois Generates Poisson distribution in the server-side
ds.rUnif Generates Uniform distribution in the server-side
ds.sample Performs random sampling and permuting of vectors, dataframes and matrices
ds.scatterPlot Generates non-disclosive scatter plots
ds.seq Generates a sequence in the server-side
ds.setSeed Server-side random number generation
ds.skewness Calculates the skewness of a server-side numeric variable
ds.sqrt Computes the square root values of a variable
ds.subset Generates a valid subset of a table or a vector
ds.subsetByClass Generates valid subset(s) of a data frame or a factor
ds.summary Generates the summary of a server-side object
ds.table Generates 1-, 2-, and 3-dimensional contingency tables with option of assigning to serverside only and producing chi-squared statistics
ds.table1D Generates 1-dimensional contingency tables
ds.table2D Generates 2-dimensional contingency tables
ds.tapply Applies a Function Over a Server-Side Ragged Array
ds.tapply.assign Applies a Function Over a Ragged Array on the server-side
ds.testObjExists Checks if an R object exists on the server-side
ds.unique Perform 'unique' on a variable on the server-side
ds.unList Flattens Server-Side Lists
ds.var Computes server-side vector variance
ds.vectorCalc Performs a mathematical operation on two or more vectors