hwgcod.db
This is the released version of hwgcod.db; for the devel version, see hwgcod.db.
Codelink Human Whole Genome Bioarray (~55 000 human genes) annotation data (chip hwgcod)
Bioconductor version: Release (3.23)
Codelink Human Whole Genome Bioarray (~55 000 human genes) annotation data (chip hwgcod) assembled using data from public repositories
Author: Diego Diez
Maintainer: Diego Diez <diego10ruiz at gmail.com>
citation("hwgcod.db")):
Huber W, Carey VJ, Gentleman R, Anders S, Carlson M, Carvalho BS, Bravo HC, Davis S, Gatto L, Girke T, Gottardo R, Hahne F, Hansen KD, Irizarry RA, Lawrence M, Love MI, MacDonald J, Obenchain V, Oleś AK, Pagès H, Reyes A, Shannon P, Smyth GK, Tenenbaum D, Waldron L, Morgan M (2015). "Orchestrating high-throughput genomic analysis with Bioconductor." Nature Methods, 12(2), 115–121. doi:10.1038/nmeth.3252.
Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge Y, Gentry J, Hornik K, Hothorn T, Huber W, Iacus S, Irizarry R, Leisch F, Li C, Maechler M, Rossini AJ, Sawitzki G, Smith C, Smyth G, Tierney L, Yang JYH, Zhang J (2004). "Bioconductor: open software development for computational biology and bioinformatics." Genome Biology, 5(10), R80. doi:10.1186/gb-2004-5-10-r80.
Installation
To install this package, start R (version "4.6") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("hwgcod.db")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
| Reference Manual |
Details
| biocViews | AnnotationData, ChipDb, CodelinkChip, Homo_sapiens, hwgcod |
| Version | 3.4.0 |
| License | Artistic-2.0 |
| Depends | R (>= 2.7.0), methods, AnnotationDbi(>= 1.31.18), org.Hs.eg.db(>= 3.2.1) |
| Imports | methods, AnnotationDbi |
| System Requirements | |
| URL |
See More
| Suggests | annotate, RUnit |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | hwgcod.db_3.4.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (big-sur-x86_64) | |
| macOS Binary (sonoma-arm64) | |
| Package Short Url | https://bioconductor.org/packages/hwgcod.db/ |
| Package Downloads Report | Download Stats |