readFCS                package:prada                R Documentation

_R_e_a_d _a_n _F_C_S _3._0 _f_i_l_e

_D_e_s_c_r_i_p_t_i_o_n:

     Read an FCS 3.0 file: Data File Standard for Flow Cytometry,
     Version FCS3.0

_U_s_a_g_e:

       readFCS(filename)

_A_r_g_u_m_e_n_t_s:

filename: Character of length 1: filename

_D_e_t_a_i_l_s:

     For specifications of FACS 3.0 see <URL: http://www.isac-net.org>
     and the file <URL: ../doc/fcs3.html> in the 'doc' directory of the
     package.

     The function works with the output of the FACS machine software
     from a number of vendors. However, the FCS 3.0 standard includes
     some options that are not yet implemented in this function. If you
     need extensions, please let me know.

_V_a_l_u_e:

     An object of class 'link[cytoFrame-class]{cytoFrame}'.

_A_u_t_h_o_r(_s):

     Wolfgang Huber <URL: http://www.ebi.ac.uk/huber>

_S_e_e _A_l_s_o:

     'readFCSdata'

_E_x_a_m_p_l_e_s:

     sampdat <- readFCS(system.file("extdata", "fas Bcl2 plate323-04-04.A01",
                                    package="prada"))
     sampdat
     exprs(sampdat[1:3,])
     description(sampdat)[3:6]

