Package: cellHTS2
Version: 2.8.3
Title: Analysis of cell-based screens - revised version of cellHTS
Author: Ligia Bras <ligia@ebi.ac.uk>, Wolfgang Huber <huber@ebi.ac.uk>,
        Michael Boutros <m.boutros@dkfz.de>, Gregoire Pau
        <gpau@ebi.ac.uk>, Florian Hahne <fhahne@fhcrc.org>
Maintainer: Florian Hahne <fhahne@fhcrc.org>
Depends: R (>= 2.6.0), RColorBrewer, Biobase (>= 1.11.12), methods,
        genefilter (>= 1.11.2), splots (>= 1.3.2), vsn (>= 3.0.15),
        hwriter (>= 0.90)
Suggests: locfit (>= 1.5-3)
Imports: prada
Description: Analysis of cell-based RNA interference screens. See
        ?cellHTS2 for a brief introduction.
Reference: Michael Boutros and Ligia P. Bras and Wolfgang Huber.
        Analysis of cell-based RNAi screens. Genome Biology 7:7 R66
        (2006).
License: Artistic-2.0
URL: http://www.dkfz.de/signaling, http://www.ebi.ac.uk/huber
biocViews: CellBasedAssays, Preprocessing, Visualization
Collate: AllClasses.R AllGeneric.R adjustVariance.R checkColumns.R
        checkControls.R configurationAsScreenPlot.R convertOldCellHTS.R
        convertWellCoordinates.R envisionPlateReader.R
        getDynamicRange.R getMeasureRepAgreement.R getTopTable.R
        getZfactor.R glossary.R htmlFunctions.R imageScreen.R
        makePlot.R methods-cellHTS.R methods-ROC.R normalizePlates.R
        oneRowPerId.R perPlateScaling.R plateConfModule.R
        plateListModule.R plateSummariesModule.R plotSpatialEffects.R
        progressReport.R readHTAnalystData.R readPlateList.R
        screenResultsModule.R screenDescriptionModule.R
        screenScriptModule.R screenSummaryModule.R
        summarizeReplicates.R tableOutput.R templateDescriptionFile.R
        writeHTML-methods.R writeReport.R write.tabdel.R zzz.R
Packaged: 2009-08-01 21:57:10 UTC; biocbuild
Built: R 2.9.1; ; 2009-08-02 01:37:33 UTC; windows
