kegg2smc                package:PGSEA                R Documentation

_K_E_G_G _p_a_t_h_w_a_y _t_o "_s_m_c"

_D_e_s_c_r_i_p_t_i_o_n:

     This function creates "smc" objects from the "KEGG" Bioconductor
     library.

_U_s_a_g_e:

     smc <- kegg2smc(min = 1, max = 284,organism="human")

_A_r_g_u_m_e_n_t_s:

     min: numeric - minimum length of ids to be included 

     max: numeric - maximum length of ids to be included  

organism: character - organism 

_V_a_l_u_e:

     a list of "smc" objects

_A_u_t_h_o_r(_s):

     Karl Dykema <karl.dykema@vai.org> and Richard Birnie
     <richard.birnie@pro-curetherapeutics.com>

_E_x_a_m_p_l_e_s:

             if(require(KEGG)){
                     mcs <- kegg2smc(min=20,max=284)
                     length(mcs)
                     str(mcs[[1]])
             }

