kegg2smc {PGSEA} | R Documentation

## KEGG pathway to "smc"

### Description

This function creates "smc" objects from the "KEGG" Bioconductor library.

### Usage

    smc <- kegg2smc(min = 1, max = 284,organism="human")

### Arguments

`min` | numeric - minimum length of ids to be included
`max` | numeric - maximum length of ids to be included
`organism` | character - organism

### Value

a list of "smc" objects

### Author(s)

Karl Dykema <karl.dykema@vai.org> and Richard Birnie <richard.birnie@pro-curetherapeutics.com>

### Examples

            if(require(KEGG)){
                    mcs <- kegg2smc(min=20,max=284)
                    length(mcs)
                    str(mcs[[1]])
            }

[Package PGSEA version 1.10.0 Index]