calculateBreakpoints {VanillaICE} | R Documentation

## Calculate breakpoints for altered states from the prediction matrix

### Description

Calculate breakpoints for altered states from the prediction matrix in an object of class `HmmPredict`

### Usage

    calculateBreakpoints(object, ...)

### Arguments

`object` | Object of class `HmmPredict`
`...` | Not implemented

### Details

Returns a matrix with information on size of region (Mb), predicted state, number of SNPs in region, chromosome number, and position.

### Value

A matrix

### Author(s)

R. Scharpf

### See Also

`summary`

[Package VanillaICE version 1.2.0 Index]