Data                package:cellHTS2                R Documentation

_A_c_c_e_s_s _a_n_d _r_e_p_l_a_c_e _t_h_e _a_s_s_a_y_D_a_t_a _s_l_o_t _o_f _a _c_e_l_l_H_T_S _o_b_j_e_c_t

_D_e_s_c_r_i_p_t_i_o_n:

     This generic function accesses and replaces the data stored in
     slot 'assayData' of an object of 'cellHTS' class.

_U_s_a_g_e:

     Data(object)
     Data(object) <- value

_A_r_g_u_m_e_n_t_s:

  object: Object derived from class 'cellHTS'.

   value: a 3D array of dimensions dim(object)[1] (this corresponds to
          the total number of features: number of wells per plate x
          number of plates) x dim(object)[2] (this corresponds to the
          number of samples or replicates) x number of channels.

_V_a_l_u_e:

     'Data' returns a 3D array containing the contents of slot
     'assayData'. This array has dimensions number of features (product
     between the number of wells per plates and the number of plates) x
     number of samples (or replicates) x number of channels.  Depending
     on the preprocessing status of the 'cellHTS' object, this array
     corresponds to the raw data, or to normalized data or to scored
     data.

     See class 'cellHTS' for details.

_A_u_t_h_o_r(_s):

     Ligia Bras ligia@ebi.ac.uk

_R_e_f_e_r_e_n_c_e_s:

     Boutros, M., Bras, L.P. and Huber, W. (2006) Analysis of
     cell-based RNAi screens, _Genome Biology_ *7*, R66.

_S_e_e _A_l_s_o:

     'cellHTS'

