byArm {VanillaICE} | R Documentation

## Fits the HMM to each chromosomal arm

### Description

Fits the HMM to each chromosomal arm. Not called directly

### Usage

    byArm(object, ...)

### Arguments

`object` | object extending `hSet` class
`...` | SCALE: (numeric) factor for scaling transition probability, MISSING.CODE for genotype calls, verbose (character string), arm (character string)

### Details

### Value

object of the same class as `object`

### Note

### Author(s)

### References

### See Also

### Examples

[Package VanillaICE version 1.0.2 Index]