normalize {codelink} | R Documentation

## Normalization wrapper for Codelink objects.

### Description

Takes a Codelink object and applies normalization to intensity values.

### Usage

        normalize(object, method="quantiles", log.it=TRUE, preserve=FALSE)

### Arguments

`object` | an object of class "Codelink".
`method` | method to use in normalization.
`log.it` | logical; if data should be log2.
`preserve` | logical; if Ri slot should be preserved.

### Details

### Value

A Codelink object with normalized intensity values.

### Note

### Author(s)

Diego Diez

### See Also

### Examples

    #       data(codelink.example)
            # Background correction.
    #       codelink.example <- bkgdCorrect(codelink.example,
    #        method="half")
            # Normalization.
    #       codelink.example <- normalize(codelink.example,
    #        method="quantile")

[Package codelink version 1.2.2 Index]