# Generated by roxygen2: do not edit by hand

export(check_modeling_results)
export(check_sce)
export(check_sce_layer)
export(check_spe)
export(enough_ram)
export(fetch_data)
export(gene_set_enrichment)
export(gene_set_enrichment_plot)
export(geom_spatial)
export(get_colors)
export(layer_boxplot)
export(layer_matrix_plot)
export(layer_stat_cor)
export(layer_stat_cor_plot)
export(run_app)
export(sce_to_spe)
export(sig_genes_extract)
export(sig_genes_extract_all)
export(sort_clusters)
export(vis_clus)
export(vis_clus_p)
export(vis_gene)
export(vis_gene_p)
export(vis_grid_clus)
export(vis_grid_gene)
import(ExperimentHub)
import(Polychrome)
import(SingleCellExperiment)
import(ggplot2)
import(grid)
import(plotly, except = last_plot)
import(shiny)
importFrom(AnnotationHub,query)
importFrom(DT,DTOutput)
importFrom(DT,renderDT)
importFrom(IRanges,CharacterList)
importFrom(IRanges,IntegerList)
importFrom(RColorBrewer,brewer.pal)
importFrom(S4Vectors,DataFrame)
importFrom(S4Vectors,metadata)
importFrom(SpatialExperiment,"imgData<-")
importFrom(SpatialExperiment,"spatialCoordsNames<-")
importFrom(SpatialExperiment,"spatialData<-")
importFrom(SpatialExperiment,SpatialImage)
importFrom(SpatialExperiment,imgData)
importFrom(SpatialExperiment,scaleFactors)
importFrom(SpatialExperiment,spatialData)
importFrom(SummarizedExperiment,"colData<-")
importFrom(SummarizedExperiment,assayNames)
importFrom(SummarizedExperiment,assays)
importFrom(benchmarkme,get_ram)
importFrom(cowplot,plot_grid)
importFrom(fields,image.plot)
importFrom(golem,with_golem_options)
importFrom(grDevices,as.raster)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,dev.off)
importFrom(grDevices,pdf)
importFrom(graphics,abline)
importFrom(graphics,axis)
importFrom(graphics,boxplot)
importFrom(graphics,par)
importFrom(graphics,points)
importFrom(graphics,text)
importFrom(grid,rasterGrob)
importFrom(grid,unit)
importFrom(jsonlite,read_json)
importFrom(methods,is)
importFrom(methods,new)
importFrom(png,readPNG)
importFrom(scater,plotReducedDim)
importFrom(sessioninfo,session_info)
importFrom(shiny,shinyApp)
importFrom(shinyWidgets,pickerInput)
importFrom(shinyWidgets,pickerOptions)
importFrom(stats,cor)
importFrom(stats,dist)
importFrom(stats,fisher.test)
importFrom(stats,hclust)
importFrom(stats,reshape)
importFrom(tibble,tibble)
importFrom(utils,read.csv)
importFrom(utils,write.csv)
importFrom(viridisLite,viridis)
