Package: spatialLIBD
Title: spatialLIBD: an R/Bioconductor package to visualize
        spatially-resolved transcriptomics data
Version: 1.4.0
Date: 2021-05-08
Authors@R: 
    c(
    person("Leonardo", "Collado-Torres", role = c("aut", "cre"), 
    email = "lcolladotor@gmail.com", comment = c(ORCID = "0000-0003-2140-308X")),
    person(c("Kristen", "R."), "Maynard",
    role = "ctb", email = "Kristen.Maynard@libd.org",
    comment = c(ORCID = "0000-0003-0031-8468")),
    person(c("Andrew", "E."), "Jaffe",
    role = "ctb", email = "andrew.jaffe@libd.org",
    comment = c(ORCID = "0000-0001-6886-1454")),
    person("Brenda", "Pardo",
    role = "ctb", email = "bpardo@lcgej.unam.mx",
    comment = c(ORCID = "0000-0001-8103-7136")),
    person("Abby", "Spangler",
    role = "ctb", email = "aspangle@gmail.com",
    comment = c(ORCID = "0000-0002-0028-9348")),
    person("Jesús", "Vélez Santiago",
    role = "ctb", email = "jvelezmagic@gmail.com",
    comment = c(ORCID = "0000-0001-5128-3838")
    )
    )
Description: Inspect interactively the spatially-resolved transcriptomics data
    from the 10x Genomics Visium platform as well as data from the 
    Maynard, Collado-Torres et al, Nature Neuroscience, 2021 project analyzed by
    Lieber Institute for Brain Development (LIBD) researchers and collaborators.
License: Artistic-2.0
Encoding: UTF-8
LazyData: true
Imports: shiny, golem, ggplot2, cowplot, plotly, viridisLite,
        shinyWidgets, Polychrome, sessioninfo, grid, grDevices,
        methods, AnnotationHub, utils, png, scater, DT, ExperimentHub,
        RColorBrewer, SummarizedExperiment, stats, graphics, S4Vectors,
        IRanges, fields, benchmarkme, SingleCellExperiment,
        BiocFileCache, jsonlite, tibble
RoxygenNote: 7.1.1
Roxygen: list(markdown = TRUE)
URL: https://github.com/LieberInstitute/spatialLIBD
BugReports: https://support.bioconductor.org/t/spatialLIBD
Suggests: knitr, RefManageR, rmarkdown, BiocStyle, testthat (>= 2.1.0),
        covr, here, BiocManager, rtracklayer, pryr
VignetteBuilder: knitr
biocViews: Homo_sapiens_Data, ExperimentHub, SequencingData,
        SingleCellData, ExpressionData, Tissue, PackageTypeData
Depends: SpatialExperiment (>= 1.1.700), R (>= 3.6)
git_url: https://git.bioconductor.org/packages/spatialLIBD
git_branch: RELEASE_3_13
git_last_commit: 74ba278
git_last_commit_date: 2021-05-19
Date/Publication: 2021-05-20
NeedsCompilation: no
Packaged: 2021-05-20 18:49:58 UTC; biocbuild
Author: Leonardo Collado-Torres [aut, cre]
    (<https://orcid.org/0000-0003-2140-308X>),
  Kristen R. Maynard [ctb] (<https://orcid.org/0000-0003-0031-8468>),
  Andrew E. Jaffe [ctb] (<https://orcid.org/0000-0001-6886-1454>),
  Brenda Pardo [ctb] (<https://orcid.org/0000-0001-8103-7136>),
  Abby Spangler [ctb] (<https://orcid.org/0000-0002-0028-9348>),
  Jesús Vélez Santiago [ctb] (<https://orcid.org/0000-0001-5128-3838>)
Maintainer: Leonardo Collado-Torres <lcolladotor@gmail.com>
