Type: Package
Package: SingleCellMultiModal
Title: Integrating Multi-modal Single Cell Experiment datasets
Version: 1.4.1
Authors@R: c(
    person(given = "Marcel", family = "Ramos",
        role = c("aut", "cre"), email = "marcel.ramos@roswellpark.org",
        comment = c(ORCID = "0000-0002-3242-0582")),
    person(given = "Ricard", family = "Argelaguet",
        role = "aut", email = "ricard@ebi.ac.uk"),
    person(given = "Dario", family = "Righelli",
        role = "aut", email = "dario.righelli@gmail.com"),
    person(given = "Kelly", family = "Eckenrode",
        role = "aut", email = "kelly.eckenrode@sph.cuny.edu"),
    person(given = "Levi", family = "Waldron",
        role = "aut", email = "lwaldron.research@gmail.com")
    )
Description: SingleCellMultiModal is an ExperimentHub package
    that serves multiple datasets obtained from GEO and other sources and
    represents them as MultiAssayExperiment objects. We provide several
    multi-modal datasets including scNMT, 10X Multiome, seqFISH, CITEseq,
    SCoPE2, and others. The scope of the package is is to provide data for
    benchmarking and analysis.
License: Artistic-2.0
BugReports: https://github.com/waldronlab/SingleCellMultiModal/issues
Depends: R (>= 4.1.0), MultiAssayExperiment
Imports: AnnotationHub, BiocFileCache, BiocGenerics, ExperimentHub,
        HDF5Array, S4Vectors, SingleCellExperiment, SpatialExperiment,
        SummarizedExperiment, Matrix, methods, utils
Suggests: BiocStyle, ggplot2, knitr, RaggedExperiment, rmarkdown,
        scater, scran, UpSetR, uwot
VignetteBuilder: knitr
biocViews: ExperimentData, SingleCellData, ReproducibleResearch,
        ExperimentHub, GEO
Encoding: UTF-8
RoxygenNote: 7.1.1
git_url: https://git.bioconductor.org/packages/SingleCellMultiModal
git_branch: RELEASE_3_13
git_last_commit: 5879cb8
git_last_commit_date: 2021-06-03
Date/Publication: 2021-06-05
NeedsCompilation: no
Packaged: 2021-06-05 16:46:15 UTC; biocbuild
Author: Marcel Ramos [aut, cre] (<https://orcid.org/0000-0002-3242-0582>),
  Ricard Argelaguet [aut],
  Dario Righelli [aut],
  Kelly Eckenrode [aut],
  Levi Waldron [aut]
Maintainer: Marcel Ramos <marcel.ramos@roswellpark.org>
