genotyping and copy number study tools

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Documentation for package ‘genoCN’ version 1.4.0

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code.genotype code bi-allele genotype to numerical value
genoCNA Copy Number Aberration
genoCNV Copy Number Variation
init.Para.CNA Initial parameters for the HMM
init.Para.CNV Initial parameters for the HMM of genoCNV
plotCN plot LRR, BAF, and the copy number estimates
snpData Simulated LRR and BAF data for 17,348 SNPs on chromosome 22.
snpInfo Information of 17,348 SNPs on chromosome 22.