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| Affy | Affy Dataset |
| AffyIlmn | cross mapping table |
| class:MULCOM | Class MulCom |
| class:MULCOM_P | Class MulCom Permutation |
| harmonicMean | MulCom Harmonic Mean |
| Illumina | Illumina Dataset |
| Ilmn | Ilmn Dataset |
| limmaAffySymbols | significant gene list with limma in Affymetrix |
| limmaIlmnSymbols | significant gene list with limma in Illumina |
| mulCalc | MulCom Calculation |
| mulCAND | Identify the Mulcom candidate feature selection |
| MULCOM | Class MulCom |
| MULCOM-class | Class MulCom |
| mulcomGeneListIlmn | significant gene list with limma in Illumina |
| MULCOM_P | Class MulCom Permutation |
| MULCOM_P-class | Class MulCom Permutation |
| mulDELTA | MulCom Delta |
| mulDiff | MulCom Test Differential analysis |
| mulFSG | MulCom False Significant Genes |
| mulIndex | Mulcom Index for Monte Carlo Simlation |
| mulInt | generates a consensus matrix from list of genes |
| mulMSE | MulCom Mean Square Error |
| mulOpt | MulCom optimization |
| mulOptPars | MulCom Parameter Optimization |
| mulOptPlot | MulCom optimization Plot |
| mulParOpt | MulCom Parameters Optimization |
| mulPerm | MulCom Permutation |
| mulPermC | MulCom Permutation |
| mulScores | MulCom Score Calculation |
| mulSSE | MulCom Sum of Square Error |
| samAffySymbols | significant gene list with SAM in Affymetrix |
| samIlmnSymbols | significant gene list with SAM in Illumina |
| samOptPars | sam Parameter Optimization |