rTANDEM-package |
An R encapsulation of X!TANDEM ('Jackhammer' release, 2013.06.15) |
GetDegeneracy |
Extract information from rTANDEM result object |
GetParamFromXML |
Convert X!Tandem xml files to R objects and vice versa |
GetPeptides |
Extract information from rTANDEM result object |
GetProteins |
Extract information from rTANDEM result object |
GetResultsFromXML |
Convert X!Tandem xml files to R objects and vice versa |
GetTaxoFromXML |
Convert X!Tandem xml files to R objects and vice versa |
rTANDEM |
Calls X!TANDEM ('Jackhammer' release, 2013.06.15) from R objects or xml files |
rtandem |
Calls X!TANDEM ('Jackhammer' release, 2013.06.15) from R objects or xml files |
rTParam |
rTANDEM S3 and S4 classes |
rTResult |
rTANDEM S3 and S4 classes |
rTResult-class |
Class '"rTResult"' |
rTTaxo |
rTANDEM S3 and S4 classes |
setParamValue |
rTANDEM S3 and S4 classes |
tandem |
Calls X!TANDEM ('Jackhammer' release, 2013.06.15) from R objects or xml files |
WriteParamToXML |
Convert X!Tandem xml files to R objects and vice versa |
WriteTaxoToXML |
Convert X!Tandem xml files to R objects and vice versa |