Package: affycompData Version: 1.1.5 Depends: R (>= 2.13.0), methods, Biobase (>= 2.3.3), affycomp License: GPL (>= 2) MD5sum: 06bd899be5ee1fc0e3ccac09dbb65e9f NeedsCompilation: no Package: affydata Version: 1.11.18 Depends: R (>= 2.4.0), affy (>= 1.23.4) Imports: methods Suggests: hgu95av2cdf, hgu133acdf License: GPL (>= 2) MD5sum: af4551eb4c9f228bca08b63fe3be85f8 NeedsCompilation: no Package: AffymetrixDataTestFiles Version: 0.1.6 Depends: R (>= 2.5.0) License: LGPL-2.1 MD5sum: 24a24f8d20605482f98477e5ad85a057 NeedsCompilation: no Package: ALL Version: 1.4.14 Depends: R (>= 2.10), Biobase (>= 2.5.5) Suggests: rpart License: Artistic-2.0 MD5sum: 03308d3eb4835f6a105b8a2715efc1b3 NeedsCompilation: no Package: ALLMLL Version: 1.2.14 Depends: R (>= 2.10), affy (>= 1.23.4) License: GPL-2 MD5sum: ac118f42d889797bfa35344990d5bdc3 NeedsCompilation: no Package: AmpAffyExample Version: 1.2.12 Depends: R (>= 2.4.0), affy (>= 1.23.4) Suggests: hgu133acdf License: LGPL (>= 2) MD5sum: 23e2ce500a0a60618dd619765794fc70 NeedsCompilation: no Package: antiProfilesData Version: 0.99.1 Depends: Biobase, Suggests: frma, GEOquery, GEOmetadb License: Artistic-2.0 MD5sum: f3306bd14309134de7e53403c399ee81 NeedsCompilation: no Package: ARRmData Version: 0.99.2 Depends: R (>= 3.0.0) License: Artistic-2.0 MD5sum: f2e118dd517b14c05028232ef8032fca NeedsCompilation: no Package: beadarrayExampleData Version: 1.0.6 Depends: R (>= 2.13.0), Biobase (>= 2.5.5), methods, beadarray (>= 2.0.0) License: GPL-2 MD5sum: 77bb2909b0405d56a48d0b46d44f561f NeedsCompilation: no Package: BeadArrayUseCases Version: 1.0.10 Imports: beadarray (>= 2.3.18), limma, GEOquery Suggests: Biostrings, GenomicRanges, illuminaHumanv1.db, illuminaHumanv2.db, illuminaHumanv3.db License: GPL-2 MD5sum: 7fe03db6caa34e4eaf84f29af97760ac NeedsCompilation: no Package: beta7 Version: 1.0.5 Depends: R (>= 2.4.0), marray License: LGPL MD5sum: 2df3d9bc92bc4a93077b239df0fd3878 NeedsCompilation: no Package: bladderbatch Version: 1.0.5 Depends: Biobase License: Artistic-2.0 MD5sum: 9d1eec34e2962ba1cf538fa75797fa4d NeedsCompilation: no Package: breastCancerMAINZ Version: 1.0.5 Depends: R (>= 2.5.0) Suggests: survcomp, genefu, Biobase License: Artistic-2.0 MD5sum: f49492f42bbdd8c0cb058d1270c0d9de NeedsCompilation: no Package: breastCancerNKI Version: 1.0.5 Depends: R (>= 2.5.0) Suggests: survcomp, genefu, Biobase License: Artistic-2.0 MD5sum: 1f26a1604bba2988e50787e26adf612a NeedsCompilation: no Package: breastCancerTRANSBIG Version: 1.0.5 Depends: R (>= 2.5.0) Suggests: survcomp, genefu, Biobase License: Artistic-2.0 MD5sum: 8156e3e6f2c9782f455eae4e1852b409 NeedsCompilation: no Package: breastCancerUNT Version: 1.0.5 Depends: R (>= 2.5.0) Suggests: survcomp, genefu, Biobase License: Artistic-2.0 MD5sum: 7cd0d37525473ba4cc2b4e25557f7510 NeedsCompilation: no Package: breastCancerUPP Version: 1.0.5 Depends: R (>= 2.5.0) Suggests: survcomp, genefu, Biobase License: Artistic-2.0 MD5sum: 0592f875629636c3064f14d2983810ec NeedsCompilation: no Package: breastCancerVDX Version: 1.0.5 Depends: R (>= 2.5.0) Suggests: survcomp, genefu, Biobase License: Artistic-2.0 MD5sum: bac5c1124cfcb0a7c91c571dabd03361 NeedsCompilation: no Package: bronchialIL13 Version: 1.0.11 Depends: R(>= 2.10.0), affy (>= 1.23.4) License: GPL-2 MD5sum: 8aaeeb37fb78b4d67ee9a5f28e73b022 NeedsCompilation: no Package: bsseqData Version: 0.1.3 Depends: R (>= 2.15), bsseq License: Artistic-2.0 MD5sum: b8d7471c1020f1c7d14b8e0baee8b9f2 NeedsCompilation: no Package: cancerdata Version: 1.1.2 Depends: R (>= 2.10.1), Biobase License: GPL (>= 2) MD5sum: cd0159a4315245f97bf91f32e587ff08 NeedsCompilation: no Package: CCl4 Version: 1.0.14 Depends: R (>= 2.6.0), Biobase (>= 2.5.5), limma License: Artistic-2.0 MD5sum: 2e43c722d848cbac80dfc06acda002e9 NeedsCompilation: no Package: ccTutorial Version: 1.0.23 Depends: R (>= 2.10), Ringo(>= 1.9.8), affy(>= 1.23.4), topGO(>= 1.13.1) Imports: Biobase Suggests: biomaRt, Biobase(>= 2.5.5), xtable License: Artistic-2.0 MD5sum: 525526ad6447da882505d29e4cafac1f NeedsCompilation: no Package: ceu1kg Version: 0.0.32 Depends: R (>= 2.12.0), GGBase (>= 3.9.0), GGtools, Biobase Suggests: SNPlocs.Hsapiens.dbSNP.20101109 License: Artistic-2.0 MD5sum: 6fef2de2dd00139698bb64878f975dc9 NeedsCompilation: no Package: ceuhm3 Version: 0.0.15 Depends: R (>= 2.12.0), GGBase, Biobase Imports: GGtools License: Artistic-2.0 MD5sum: 04fbb1a3e70de3299ef240308d48f012 NeedsCompilation: no Package: cgdv17 Version: 0.0.20 Depends: R (>= 2.15), VariantAnnotation, org.Hs.eg.db, methods, GGtools, TxDb.Hsapiens.UCSC.hg19.knownGene, parallel Imports: Biobase, IRanges License: Artistic-2.0 MD5sum: c654e468c39b0471bdd9535610a84ff6 NeedsCompilation: no Package: charmData Version: 0.99.8 Depends: R(>= 2.11.0), charm, pd.charm.hg18.example License: LGPL (>= 2) MD5sum: d7401a5ea2efbbdddfa7686bb588b39e NeedsCompilation: no Package: cheung2010 Version: 0.0.27 Depends: R (>= 2.13.0), Biobase, GGtools, GenomicRanges, hgfocus.db Imports: AnnotationDbi Suggests: SNPlocs.Hsapiens.dbSNP.20100427, SNPlocs.Hsapiens.dbSNP.20101109, Enhances: parallel License: Artistic-2.0 MD5sum: 700c061d65c4a143e0d72f846830d27a NeedsCompilation: no Package: ChIPXpressData Version: 1.0.0 Depends: bigmemory License: GPL (>= 2) MD5sum: dd7ccb0728e34674497659a43254ee61 NeedsCompilation: no Package: CLL Version: 1.2.14 Depends: R (>= 2.10), affy (>= 1.23.4), Biobase (>= 2.5.5) License: LGPL MD5sum: e6103f62f16af727b0505904b6684912 NeedsCompilation: no Package: cMap2data Version: 0.99.2 Depends: R (>= 2.10) License: GPL-3 MD5sum: 8fd5643ac28cd474bc86e2a7b90e2b02 NeedsCompilation: no Package: cnvGSAdata Version: 0.99.4 Depends: R (>= 2.10), cnvGSA License: LGPL MD5sum: f4847ac5a63340bb0911670c6826fd6e NeedsCompilation: no Package: colonCA Version: 1.4.11 Depends: Biobase (>= 2.5.5) License: LGPL MD5sum: 523197fd3e3c9701cfc54581539853d1 NeedsCompilation: no Package: ConnectivityMap Version: 0.99.10 Depends: R (>= 2.15.1) Suggests: RUnit, BiocGenerics License: GPL-3 MD5sum: b75fff26cb1148229d9af5da9c0e9215 NeedsCompilation: no Package: curatedOvarianData Version: 1.0.3 Depends: R (>= 2.10.0), affy Imports: BiocGenerics Suggests: survival, RUnit, metafor, genefilter, futile.logger, sva, xtable License: Artistic-2.0 MD5sum: 60949aef223811452b1dc19bd3e939e3 NeedsCompilation: no Package: davidTiling Version: 1.2.17 Depends: R (>= 2.10), Biobase (>= 2.5.5), tilingArray, GO.db License: LGPL MD5sum: 196c79191b25674153402364e8e5df32 NeedsCompilation: no Package: DLBCL Version: 1.3.6 Depends: R(>= 2.11.0), Biobase License: GPL (>= 2) MD5sum: 99567ede19af0e000b2d4b34bf1a97be NeedsCompilation: no Package: DREAM4 Version: 0.99.17 Depends: R (>= 2.15.1), GenomicRanges Imports: BiocGenerics Suggests: RUnit, networkBMA License: GPL MD5sum: 873fcc56bdd06a41023e67cb3c4dff6f NeedsCompilation: no Package: dressCheck Version: 0.1.7 Depends: R (>= 2.10.1), methods, Biobase (>= 2.5.5) Suggests: survival, chron License: Artistic-2.0 MD5sum: 0af6c56edb0b44b4887293b2e22b957a NeedsCompilation: no Package: DrugVsDiseasedata Version: 0.99.4 Depends: R (>= 2.10) License: GPL-3 MD5sum: 6ed41b0cb0106c154ff09e94a31e4308 NeedsCompilation: no Package: dsQTL Version: 0.0.23 Depends: R (>= 2.15.0), utils, GenomicRanges, Biobase, GGBase License: Artistic-2.0 MD5sum: 8ae9f9f2c7d7a86e4517d205972795c2 NeedsCompilation: no Package: DvDdata Version: 0.99.1 Depends: R (>= 2.10) License: GPL-3 MD5sum: 6db2469ff296497bda64348a338c92f3 NeedsCompilation: no Package: dyebiasexamples Version: 1.0.10 Depends: R (>= 1.4.1), marray, GEOquery Suggests: dyebias, convert, Biobase License: GPL-3 MD5sum: b2b7ef628b71612cf0dac8d646b47df6 NeedsCompilation: no Package: EatonEtAlChIPseq Version: 0.0.9 Depends: GenomicRanges (>= 1.5.42), ShortRead, rtracklayer License: Artistic-2.0 MD5sum: 32b0d36e64608224dd02305db448a524 NeedsCompilation: no Package: ecoliLeucine Version: 1.2.10 Depends: R (>= 1.9.0), affy (>= 1.23.4), ecolicdf License: GPL (>= 2) MD5sum: 23ac942642e3357056b0a9ba97049370 NeedsCompilation: no Package: encoDnaseI Version: 0.1.16 Depends: R (>= 2.15.0), methods, Biobase (>= 2.5.5), lattice, GGtools, GGBase Suggests: GGdata License: Artistic-2.0 MD5sum: 1ce71886be5e8ec073eb3c5e485478fb NeedsCompilation: no Package: estrogen Version: 1.8.10 Depends: R (>= 1.9.0), affy (>= 1.4) Suggests: Biobase (>= 1.13.16), affy, vsn, hgu95av2.db, genefilter License: LGPL MD5sum: 023b8e3b29a016865f2214a97e9ae2d7 NeedsCompilation: no Package: faahKO Version: 1.2.15 Depends: xcms License: LGPL MD5sum: 5558c3250765ac3c4540d2b3c9567b65 NeedsCompilation: no Package: fabiaData Version: 1.0.2 Depends: R (>= 2.10.0), Biobase Imports: utils Suggests: fabia License: LGPL (>= 2.1) MD5sum: 6737b2d95b667dc1171bba4293aaedfb NeedsCompilation: no Package: facsDorit Version: 1.4.7 Depends: R (>= 1.9.1), prada (>= 1.0.5) License: GPL-2 MD5sum: 52e5d173c83dabecc6e90f57aad7668f NeedsCompilation: no Package: FANTOM3and4CAGE Version: 0.99.1 Depends: R (>= 2.15.0) License: GPL-3 MD5sum: c4d160a22a1683fb5a6d412121f1db09 NeedsCompilation: no Package: ffpeExampleData Version: 1.0.3 Depends: R (>= 2.10.0), lumi Suggests: genefilter, affy License: GPL (> 2) MD5sum: c4be991ead957d8a8c185b3cb4410f8d NeedsCompilation: no Package: fibroEset Version: 1.4.9 Depends: Biobase (>= 2.5.5) License: LGPL MD5sum: b3e96c7411a17aa45da7a0525e2a1792 NeedsCompilation: no Package: flowWorkspaceData Version: 1.99.9 License: GPL-2 MD5sum: d30c3dab56ea7065ee26752fe2250c15 NeedsCompilation: no Package: frmaExampleData Version: 0.99.5 Depends: R (>= 2.10.0) License: GPL (>= 2) MD5sum: 36a6a436af2039c25ec176e0720cd292 NeedsCompilation: no Package: FunciSNP.data Version: 0.99.2 Depends: R (>= 2.14.0) Imports: rtracklayer License: GPL-3 MD5sum: 2ea1394e00ed614af76326fde361e713 NeedsCompilation: no Package: gageData Version: 2.0.2 Depends: R (>= 2.10) Suggests: gage, pathview, genefilter License: GPL (>= 2.0) MD5sum: 9abec8bb3a62ed115ee42adc22aab3f0 NeedsCompilation: no Package: gaschYHS Version: 1.0.11 Depends: R (>= 2.14.0), Biobase (>= 2.5.5) License: Artistic-2.0 MD5sum: 965d2bcf3feb7c316dacfdc9b4f49ae9 NeedsCompilation: no Package: gatingMLData Version: 1.0.7 Depends: R (>= 1.9.0) Suggests: flowUtils License: GPL MD5sum: 5ad1ef143a154e12d8c23a20aab903eb NeedsCompilation: no Package: gcspikelite Version: 1.0.9 Depends: R (>= 2.5.0) License: LGPL MD5sum: c2564532e04a622115f9f1a05a2b6b00 NeedsCompilation: no Package: geneLenDataBase Version: 0.99.11 Depends: R (>= 2.11.0) Imports: utils, rtracklayer, GenomicFeatures (>= 1.3.15) License: LGPL (>= 2) MD5sum: 6b7a6f4bd3e073b2e1364dd8881cc919 NeedsCompilation: no Package: GGdata Version: 1.0.21 Depends: R (>= 2.12.0), methods, Biobase (>= 2.5.5), GGBase, snpStats, illuminaHumanv1.db, AnnotationDbi Enhances: GGtools License: LGPL MD5sum: 3817167fd420b4b6f1ea24408a2a9b63 NeedsCompilation: no Package: ggtut Version: 0.0.44 Depends: R (>= 2.14.0), GGtools (>= 3.11.32), ff, GenomicRanges, snpStats, GGdata, GenomicFeatures, ChIPpeakAnno, Rsamtools(>= 1.5.35), cheung2010, SNPlocs.Hsapiens.dbSNP.20120608, hmyriB36 Suggests: rtracklayer, GenomicFeatures, ChIPpeakAnno, TxDb.Hsapiens.UCSC.hg18.knownGene License: Artistic-2.0 MD5sum: 6b9945c61d7f1cf2bf08a841f0a0819c NeedsCompilation: no Package: golubEsets Version: 1.4.13 Depends: R (>= 2.14.0), Biobase (>= 2.5.5) License: LGPL MD5sum: 712f67e73561a3e8fd725e704a06ad4d NeedsCompilation: no Package: GSVAdata Version: 0.99.10 Depends: R (>= 2.10), Biobase, GSEABase, hgu95a.db License: GPL (>= 2) MD5sum: 13e99fc5abf4cdb7cb5dd447e29c8f50 NeedsCompilation: no Package: GWASdata Version: 1.0.9 Depends: GWASTools License: Artistic-2.0 MD5sum: a898dc6cbc5addce1f4fdacc78143b80 NeedsCompilation: no Package: hapmap100khind Version: 1.4.2 Suggests: oligo License: GPL MD5sum: 58d49fe9977fc53e6c2424dc54b59be4 NeedsCompilation: no Package: hapmap100kxba Version: 1.4.2 Suggests: oligo License: GPL MD5sum: 9f964492258eef6c32bc06225eb8063b NeedsCompilation: no Package: hapmap500knsp Version: 1.4.2 Suggests: oligo License: GPL MD5sum: c23de7f014e1e93e9cacd5418744fa5d NeedsCompilation: no Package: hapmap500ksty Version: 1.4.2 Suggests: oligo License: GPL MD5sum: ec50f3835d419bf61e8485ab94054555 NeedsCompilation: no Package: hapmapsnp5 Version: 1.4.2 Suggests: oligo License: GPL MD5sum: c9bdb584b930b7b486b96cf0b71d35ec NeedsCompilation: no Package: hapmapsnp6 Version: 1.4.2 Depends: R (>= 2.15) Suggests: oligo, oligoClasses License: GPL MD5sum: aecef7ba327a0c692ae01e9abedbdf11 NeedsCompilation: no Package: harbChIP Version: 1.0.10 Depends: R (>= 2.10.0), tools, utils, IRanges, Biobase (>= 2.5.5), Biostrings Imports: methods, stats License: Artistic-2.0 MD5sum: d3ca4fc194edd864b47e1eae8573abcf NeedsCompilation: no Package: HD2013SGI Version: 1.00.1 Depends: RColorBrewer, gplots, geneplotter, splots, limma, vcd, LSD,EBImage License: Artistic-2.0 MD5sum: 70a9a51836407752c7e95d1702dfed25 NeedsCompilation: no Package: HEEBOdata Version: 1.0.5 License: LGPL MD5sum: bb55c079c64eca34180c07809d11f7f9 NeedsCompilation: no Package: hgu133abarcodevecs Version: 1.0.6 Depends: R (>= 2.10.0) License: GPL (>= 2) MD5sum: b5099068dfe693402bf809ad3d84519a NeedsCompilation: no Package: hgu133plus2barcodevecs Version: 1.0.6 Depends: R (>= 2.10.0) License: GPL (>= 2) MD5sum: 1db90591ba23bd44a1c1b372daabcafe NeedsCompilation: no Package: hgu2beta7 Version: 1.2.8 Depends: R (>= 2.0.0) License: Artistic-2.0 MD5sum: e22217ea1507c581749505eab3d3254c NeedsCompilation: no Package: HIVcDNAvantWout03 Version: 1.2.8 License: GPL (>= 2) MD5sum: c6005d22731916c9fdad230453faf8c2 NeedsCompilation: no Package: hmyriB36 Version: 0.99.17 Depends: R (>= 2.13.0), methods, Biobase (>= 2.5.5), GGBase Suggests: GGtools, illuminaHumanv1.db License: Artistic-2.0 MD5sum: b8dbc414014d018f2d6664e04b8dc034 NeedsCompilation: no Package: humanStemCell Version: 0.2.8 Depends: Biobase (>= 2.5.5), hgu133plus2.db License: Artistic-2.0 MD5sum: 98a316eb83af3194398855a012867cd7 NeedsCompilation: no Package: ind1KG Version: 0.1.15 Depends: R (>= 2.10.1), chopsticks Suggests: Rsamtools, rtracklayer, GenomicFeatures, org.Hs.eg.db, SNPlocs.Hsapiens.dbSNP.20090506, TxDb.Hsapiens.UCSC.hg18.knownGene, lumiHumanIDMapping, GGBase, GGtools, hmyriB36 License: Artistic-2.0 MD5sum: ceefecac2e883548345584e894b278ed NeedsCompilation: no Package: iontreeData Version: 0.99.8 License: GPL-2 MD5sum: 80ae8ad965d409ffb0b53395e2fb3316 NeedsCompilation: no Package: ITALICSData Version: 2.0.7 Depends: R (>= 2.0.0) License: GPL MD5sum: 95a9f78fc676df33f0281791d57bc1f7 NeedsCompilation: no Package: Iyer517 Version: 1.4.12 Depends: Biobase (>= 2.5.5) License: Artistic-2.0 MD5sum: 52d4456ccbb290872e7fb098fd2e5bc0 NeedsCompilation: no Package: KEGGdzPathwaysGEO Version: 1.1.2 Depends: R (>= 2.13.0) Imports: Biobase, BiocGenerics License: GPL-2 MD5sum: 1cc6e4d2bfcf1aab94661532ae01ce88 NeedsCompilation: no Package: kidpack Version: 1.5.12 Depends: R (>= 2.6.0), Biobase (>= 2.5.5) License: GPL-2 MD5sum: ef4f8783f412fc1844ca1f3b4d9ccc74 NeedsCompilation: no Package: leeBamViews Version: 0.99.22 Depends: R (>= 2.15.0), Biobase, Rsamtools (>= 0.1.50), BSgenome Imports: GenomicRanges, methods Suggests: GenomeGraphs, biomaRt, org.Sc.sgd.db, edgeR Enhances: multicore License: Artistic-2.0 MD5sum: 05f56e6cd0bfe0f12742c2de3dced627 NeedsCompilation: no Package: leukemiasEset Version: 0.99.3 Depends: R (>= 2.10.1), Biobase (>= 2.5.5) License: GPL (>= 2) MD5sum: 72d1f94d10a51affd881eabc24309ad4 NeedsCompilation: no Package: LiebermanAidenHiC2009 Version: 0.1.14 Depends: KernSmooth, IRanges License: LGPL MD5sum: 56118e5f6dc364b0c329698190f18734 NeedsCompilation: no Package: lumiBarnes Version: 1.3.10 Depends: R (>= 2.0), Biobase (>= 2.5.5), lumi (>= 1.1.0) License: LGPL MD5sum: c7c8a1781504e93995f1b3dd91e07aed NeedsCompilation: no Package: LungCancerLines Version: 0.0.8 Imports: Rsamtools License: Artistic-2.0 MD5sum: b21f7bf69103664c0336f19faab38855 NeedsCompilation: no Package: lungExpression Version: 0.0.15 Depends: R (>= 2.4.0), Biobase (>= 2.5.5) License: GPL (>= 2) MD5sum: 9340d9e4b1106bff98029e0ea32d29e2 NeedsCompilation: no Package: maqcExpression4plex Version: 1.6.2 Suggests: oligo, pdInfoBuilder License: GPL MD5sum: cd3a0c23be2bf5ab4263c7a2b60ff7fc NeedsCompilation: no Package: MAQCsubset Version: 1.0.27 Depends: R (>= 2.10.0), affy (>= 1.23.4), Biobase (>= 2.5.5), lumi, methods Suggests: genefilter, codelink License: Artistic-2.0 MD5sum: f9f93b5ecce408c977b08797c4ae9763 NeedsCompilation: no Package: MAQCsubsetAFX Version: 1.0.11 Depends: R (>= 2.10), affy (>= 1.23.4), Biobase (>= 2.5.5) License: Artistic-2.0 MD5sum: c226a4358387a34b91f20af1810c5c34 NeedsCompilation: no Package: MAQCsubsetILM Version: 1.0.10 Depends: R (>= 2.10), Biobase (>= 2.5.5), lumi License: Artistic-2.0 MD5sum: 8c6198266f85f2e900e8d78ea1ab9c59 NeedsCompilation: no Package: MEDIPSData Version: 0.99.4 Depends: R (>= 2.15.0) License: GPL (>= 2) MD5sum: a9b3acc4ba95f7d5287efe294a1a01a2 NeedsCompilation: no Package: MEEBOdata Version: 1.0.5 License: LGPL MD5sum: 1eae708f3e3664040cddbcee370710c0 NeedsCompilation: no Package: minfiData Version: 0.3.4 Depends: R (>= 2.13.0), minfi, IlluminaHumanMethylation450kmanifest, IlluminaHumanMethylation450kannotation.ilmn.v1.2 License: Artistic-2.0 MD5sum: 3a6edb0e12264f2d34466882588ee61e NeedsCompilation: no Package: miRNATarget Version: 0.99.3 Depends: R (>= 2.10), Biobase License: GPL MD5sum: 2155e1c9f01afd0e801fb93bcf9e3adf NeedsCompilation: no Package: MMDiffBamSubset Version: 0.99.3 Suggests: MMDiff License: LGPL MD5sum: f5c537700f91ed4cb84b07fde35d57fb NeedsCompilation: no Package: mosaicsExample Version: 0.99.8 Depends: R (>= 2.11.1) License: GPL (>= 2) MD5sum: a149480188ff8db68eefca85d69c8ae2 NeedsCompilation: no Package: mouse4302barcodevecs Version: 1.0.6 Depends: R (>= 2.10.0) License: GPL (>= 2) MD5sum: 5edb8e93a70410346c907b50bfd8ad1c NeedsCompilation: no Package: msdata Version: 0.1.13 Suggests: xcms License: GPL (>= 2) MD5sum: 2bed858e0c9064e84966dc3c3fb0594a NeedsCompilation: no Package: Mulder2012 Version: 0.2.3 Depends: R (>= 2.14), org.Hs.eg.db, KEGG.db Imports: igraph, HTSanalyzeR, PANR, RedeR, pvclust, MASS Suggests: snow License: Artistic-2.0 MD5sum: a7fcef007695416742b9c328659f87ae NeedsCompilation: no Package: mvoutData Version: 0.99.10 Depends: R (>= 2.10.0), methods, Biobase (>= 2.5.5), affy (>= 1.23.4), lumi License: Artistic-2.0 MD5sum: 4ff75bcd6ba3b072ddc3ce0e10aedd2f NeedsCompilation: no Package: NCIgraphData Version: 0.99.6 Depends: R (>= 2.10.0) Suggests: Rgraphviz License: GPL-3 MD5sum: 8636470d7da934e7407940f765be7927 NeedsCompilation: no Package: Neve2006 Version: 0.1.16 Depends: R (>= 2.14.0), tools, methods, utils, Biobase (>= 1.14.0), hgu133a.db, annotate License: Artistic-2.0 MD5sum: 0ba2c514b6cf2488639adffbe868115c NeedsCompilation: no Package: parathyroid Version: 0.99.6 Depends: DEXSeq, DESeq, R (>= 2.10) Suggests: GEOquery, SRAdb License: LGPL MD5sum: ae41e0fcc47c38243ba28401374de076 NeedsCompilation: no Package: parathyroidSE Version: 0.99.5 Depends: GenomicRanges, R (>= 2.10) Suggests: Rsamtools, GEOquery, SRAdb License: LGPL MD5sum: db03ee6c8d2e3eab8ceaa014d022539a NeedsCompilation: no Package: pasilla Version: 0.2.16 Depends: DEXSeq, DESeq Suggests: locfit, edgeR, xtable License: LGPL MD5sum: 2f6182bd0a48710573098a968acb5a81 NeedsCompilation: no Package: pasillaBamSubset Version: 0.0.7 Suggests: pasilla License: LGPL MD5sum: fb6fb4efc7af686082d9d25315f5722d NeedsCompilation: no Package: PathNetData Version: 0.99.2 Depends: R (>= 1.14.0) License: GPL-3 MD5sum: b925c19ab129d2c1af055d677e2d5337 NeedsCompilation: no Package: pcaGoPromoter.Hs.hg19 Version: 0.99.4 License: GPL (>= 2) MD5sum: 84b900434bf4086fe27b2b43a9f737c4 NeedsCompilation: no Package: pcaGoPromoter.Mm.mm9 Version: 0.99.4 License: GPL (>= 2) MD5sum: 2bf6fdc3e0d757cdbd5bcff097a0ccb2 NeedsCompilation: no Package: pcaGoPromoter.Rn.rn4 Version: 0.99.4 License: GPL (>= 2) MD5sum: 6d70db5ae0c9028799c8fffc36c0e89f NeedsCompilation: no Package: pd.atdschip.tiling Version: 0.0.5 Depends: R (>= 2.14.0), methods, RSQLite (>= 0.10.0), oligoClasses (>= 1.15.58), oligo (>= 1.17.3), DBI Imports: Biostrings (>= 2.21.11), IRanges (>= 1.11.31) License: Artistic-2.0 MD5sum: 1207e2973d97067e72311f1983291265 NeedsCompilation: no Package: ppiData Version: 0.1.22 Depends: graph Imports: AnnotationDbi Suggests: org.Sc.sgd.db, ppiStats License: Artistic-2.0 MD5sum: 6f5935507435df4ae6b50e7bcce87360 NeedsCompilation: no Package: prebsdata Version: 0.99.4 Depends: R (>= 2.14.0) License: Artistic-2.0 MD5sum: fa05bb2d60fe3777691be8d5cb949d06 NeedsCompilation: no Package: PREDAsampledata Version: 0.2.7 Depends: R (>= 2.9.0), methods, PREDA, Biobase, affy, annotate, gahgu133plus2.db, gahgu133plus2cdf Suggests: hgu133plus2.db, hgu133plus2cdf License: Artistic-2.0 MD5sum: 1c0be7e6bb81a37dc24341cdc7c1c9c5 NeedsCompilation: no Package: ProData Version: 1.0.8 Depends: R (>= 2.4.0), Biobase (>= 2.5.5) License: GPL MD5sum: 5c745a321c3cfcfad7197d651c4d70f2 NeedsCompilation: no Package: pRolocdata Version: 1.0.2 Depends: R (>= 2.15), MSnbase Suggests: pRoloc License: GPL-2 MD5sum: 76257c2634ef0e6de4627b7ddd27ee23 NeedsCompilation: no Package: pumadata Version: 1.99.5 Depends: R (>= 2.10.0), affy (>= 1.23.4), Biobase (>= 2.5.5), puma License: LGPL MD5sum: 0e2eb0c95cc9d9dc93e166a70b2a9933 NeedsCompilation: no Package: PWMEnrich.Dmelanogaster.background Version: 2.1.0 Depends: methods, PWMEnrich License: GPL-3 MD5sum: 48de7f07baeff9c6c01ce3abe962f972 NeedsCompilation: no Package: RforProteomics Version: 1.0.13 Imports: R.utils, Biobase Suggests: mzR, MSnbase, xcms, msdata, isobar, MALDIquant, MALDIquantForeign, readBrukerFlexData, rTANDEM, synapter, synapterdata, IPPD, Rdisop, OrgMassSpecR, BRAIN, rols, hpar, GO.db, org.Hs.eg.db, biomaRt, RColorBrewer, ggplot2, reshape2, knitr, biocViews, xtable Enhances: cleaver License: Artistic-2.0 MD5sum: 229b8740d3d6533e9f2aab1fe4f48672 NeedsCompilation: no Package: rheumaticConditionWOLLBOLD Version: 1.0.3 Depends: R (>= 2.10.0) Suggests: genefilter, Biobase, hgu133plus2.db License: Artistic-2.0 MD5sum: 1c8d6d1d9dbd4381f3e54341c3b5fbdf NeedsCompilation: no Package: RIPSeekerData Version: 0.99.1 Depends: RIPSeeker License: GPL-2 MD5sum: 9032d0f3e23e10164c29c6714ccac54d NeedsCompilation: no Package: RMassBankData Version: 0.99.2 Suggests: RMassBank License: Artistic-2.0 MD5sum: 76b7f33ded2e6071a73f83ad255cf8bb NeedsCompilation: no Package: RNAinteractMAPK Version: 1.0.11 Depends: R (>= 2.12.0), methods, fields, sparseLDA, RNAinteract Imports: grid, gdata, MASS, genefilter Suggests: qvalue, lattice License: Artistic-2.0 MD5sum: 792cfadcd0d789a25c738e51dbcdc39a NeedsCompilation: no Package: RNAseqData.HeLa.bam.chr14 Version: 0.1.4 Depends: RNAseqData.HNRNPC.bam.chr14 Imports: RNAseqData.HNRNPC.bam.chr14 License: LGPL MD5sum: 25818bce46e73abdf2547be89d367632 NeedsCompilation: no Package: RNAseqData.HNRNPC.bam.chr14 Version: 0.1.3 Suggests: Rsamtools, BiocInstaller License: LGPL MD5sum: 369686c4b3b75ff6b5fb9f57d451fd1a NeedsCompilation: no Package: RNASeqDataSubset Version: 0.99.1 Depends: Rsamtools (>= 1.9.8) Imports: xtable License: LGPL MD5sum: 35bf9fa7b2f23b48d6e4f267f0cbde7f NeedsCompilation: no Package: RnaSeqTutorial Version: 0.0.12 Depends: R (>= 2.15.0), methods, easyRNASeq Suggests: Rsamtools, ShortRead, BSgenome.Dmelanogaster.UCSC.dm3, GenomicRanges, biomaRt, genomeIntervals License: Artistic-2.0 MD5sum: 805df85c3baf7091c08055be0b972144 NeedsCompilation: no Package: serumStimulation Version: 0.99.4 Depends: R (>= 2.10) License: GPL (>= 2) MD5sum: 9013b307d5723b0dd4a0c13ddb213329 NeedsCompilation: no Package: simpIntLists Version: 0.99.4 License: GPL (>= 2) MD5sum: 458e8cda1b22f3dc798f114f85b29a64 NeedsCompilation: no Package: SNAData Version: 1.8.6 Depends: R (>= 2.4.0), graph Suggests: Rgraphviz License: LGPL MD5sum: 577ac57c499c1bf8a6dcdd00df008dac NeedsCompilation: no Package: SNAGEEdata Version: 0.99.1 Depends: R (>= 2.6.0) Suggests: ALL, hgu95av2.db, SNAGEE License: Artistic-2.0 MD5sum: 65227796015c68c494785ca4e0e86084 NeedsCompilation: no Package: SomatiCAData Version: 1.1.0 Depends: R (>= 2.14) License: Artistic-2.0 MD5sum: 7150f3d30d1f92cf86d65e3cff94db9a NeedsCompilation: no Package: SpikeIn Version: 1.4.10 Depends: R (>= 1.6), affy (>= 1.23.4) License: Artistic-2.0 MD5sum: 6ad3a3d770e097a93edcc446cac36745 NeedsCompilation: no Package: SpikeInSubset Version: 1.2.13 Depends: R (>= 2.4.0), Biobase (>= 2.5.5), affy (>= 1.23.4) License: LGPL MD5sum: 4da1b26d44b98c28c35f24d2216dbbd0 NeedsCompilation: no Package: stemHypoxia Version: 0.99.3 Depends: R (>= 2.14.1) License: GPL (>= 2) MD5sum: ed94359540545f15a9bb8ab556753a15 NeedsCompilation: no Package: stjudem Version: 1.2.9 Depends: R (>= 2.10), utils License: LGPL (>= 2) MD5sum: 61dd3e8c459a85159812e365e4223580 NeedsCompilation: no Package: synapterdata Version: 1.0.0 Depends: R (>= 2.10), synapter (>= 0.99.6) License: GPL-2 MD5sum: f2cd39a0a975f4af61930cfeaaeb8182 NeedsCompilation: no Package: TargetSearchData Version: 1.0.9 Depends: TargetSearch License: GPL (>= 2) MD5sum: b377943c30b5cd43e37a74dfe4bda6da NeedsCompilation: no Package: TBX20BamSubset Version: 0.99.2 Depends: Rsamtools (>= 1.9.8) Imports: xtable License: LGPL MD5sum: d31adfb7ca3274e4c688719ebdb4e6a6 NeedsCompilation: no Package: TCGAMethylation450k Version: 0.99.4 License: GPL-2 MD5sum: 82fca4c74226b66417aa59ce42fd4a89 NeedsCompilation: no Package: tinesath1cdf Version: 1.0.9 License: Artistic-2.0 MD5sum: 26ab25c51866b5adb05c02101904fced NeedsCompilation: no Package: tinesath1probe Version: 1.0.9 Depends: R (>= 1.6), AnnotationDbi (>= 1.11.9) License: LGPL MD5sum: 2ef967cb45feecef2c464323ca3c9886 NeedsCompilation: no Package: tweeDEseqCountData Version: 1.0.9 Depends: Biobase, R (>= 2.10) License: GPL (>= 2) MD5sum: fbacf2b5b969db791fc6f50e7fdc1d1a NeedsCompilation: no Package: waveTilingData Version: 0.99.2 Depends: R (>= 2.14.0) License: GPL (>= 2) MD5sum: 810a2febfe885d185fa7c5c8dae8cc50 NeedsCompilation: no Package: XhybCasneuf Version: 1.0.11 Depends: R (>= 2.4.0), affy , ath1121501cdf , tinesath1cdf , RColorBrewer , methods, grid License: Artistic-2.0 MD5sum: 40b83a5f52b1118bd5129563a7d581da NeedsCompilation: no Package: yeastCC Version: 1.2.18 Depends: Biobase (>= 2.5.5) License: Artistic-2.0 MD5sum: 74e41a9e3542162ff82c03d7bbdf1ac1 NeedsCompilation: no Package: yeastExpData Version: 0.9.22 Depends: R (>= 2.4), graph (>= 1.9.26) Suggests: Biobase, GO.db, RBGL, org.Sc.sgd.db License: GPL MD5sum: 3f310c6873752bdbed01e333c73d4718 NeedsCompilation: no Package: yeastGSData Version: 0.1.10 License: Artistic-2.0 MD5sum: 3256eadccabd583bf4fed64b8d6604b0 NeedsCompilation: no Package: yeastNagalakshmi Version: 0.99.6 License: Artistic-2.0 MD5sum: e8ebf3daa53e737609d5620528f00edc NeedsCompilation: no Package: yeastRNASeq Version: 0.0.8 Depends: R (>= 2.4) Suggests: Biobase, ShortRead, IRanges License: GPL MD5sum: 214b3f9f29ad7e03ab619923674e5713 NeedsCompilation: no