proboStruct-class {MAQCsubset}R Documentation

Class "proboStruct"

Description

structure for managing proboscis plot data

Objects from the Class

Objects can be created by calls of the form new("proboStruct", ...).

Slots

.Data:
Object of class "list" ~~
call:
Object of class "call" ~~

Extends

Class "list", from data part. Class "vector", by class "list", distance 2. Class "AssayData", by class "list", distance 2.

Methods

plot

Note

The proboscis plot shows how the probability of self-consistent monotone titration (SCMT) varies with the spiked difference in concentrations of two mRNA preparations in an MAQC dataset.

Author(s)

V Carey <stvjc@channing.harvard.edu>

References

For Figure 2 of Shippy et al., Using RNA sample titrations... (Nat Biotech, 24(9):1123-1131, Sep 2006)

Examples

data(afxsubRMAES)
NN1 = proboscis(afxsubRMAES)
plot(NN1)
showClass("proboStruct")

[Package MAQCsubset version 1.0.2 Index]