ErmaSet-class {erma} | R Documentation |
"ErmaSet"
Wrap a GenomicFiles instance representing roadmap bed files.
makeErmaSet() subsetByRanges( ermaset, range )
ermaset |
an instance of |
range |
an instance of |
Objects can be created by calls of the form new("ErmaSet", ...)
.
Simple extension of GenomicFiles.
files
:Object of class "ANY"
~~
rowRanges
:Object of class "GenomicRangesORGRangesList"
~~
colData
:Object of class "DataFrame"
~~
assays
:Object of class "Assays"
~~
NAMES
:Object of class "character_OR_NULL"
~~
elementMetadata
:Object of class "DataFrame"
~~
metadata
:Object of class "list"
~~
Class "GenomicFiles-class"
, directly.
Class "RangedSummarizedExperiment-class"
, by class "GenomicFiles", distance 2.
Class "SummarizedExperiment-class"
, by class "GenomicFiles", distance 3.
Class "Vector"
, by class "GenomicFiles", distance 4.
Class "Annotated"
, by class "GenomicFiles", distance 5.
signature(x = "ErmaSet")
: ...
We would like to have methods for AnnotationHub entities too.
showClass("ErmaSet") makeErmaSet()