summaryQC {BaalChIP} | R Documentation |
Method summaryQC
Generates summary of QC result.
summaryQC(.Object) ## S4 method for signature 'BaalChIP' summaryQC(.Object)
.Object |
An object of the |
A list with two elements:
filtering_stats
containing the number of variants that were filtered out in each filter category and the total number that 'pass' all filters.
average_stats
containing the average number and average percentage of variants in each filter category, averaged across all analysed groups.
Ines de Santiago
data('BaalObject') summaryQC(BaalObject)